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2023-09-19Add pafplotEfraim Flashner
2023-09-19Add fastixEfraim Flashner
2023-09-19Add vcfbubEfraim Flashner
2023-09-19gfaffix: Update to 0.1.5.Efraim Flashner
2023-09-19Remove `rust-clap-4`Frederick Muriuki Muriithi
There is a `rust-clap-4` package upstream.
2022-12-11Revert "gn: rust-quick-csv-0.1: remove duplicated package"Efraim Flashner
This reverts commit fb631515ccf985e6e89c6cb03a86833aa3b963c6. rust-quick-csv-0.1 isn't actually in Guix yet.
2022-12-06gn: (rust-clap-4): Update dependencyFrederick Muriuki Muriithi
* gn/packages/crates-io.scm (rust-clap-4): Change from rust-terminal-size-0.2 which is undefined to rust-terminal-size-0.1
2022-12-06gn: rust-quick-csv-0.1: remove duplicated packageFrederick Muriuki Muriithi
* gn/packages/crates-io.scm (rust-quick-csv-0.1): Remove package that is also defined in mainline guix
2022-11-30gn: Remove upstreamed packagesEfraim Flashner
2022-11-29gn: (gn-rust-correlation): Update to 0.1.4-0.a22381eAlexanderKabui
* gn/packages/crates-io.scm (gn-rust-correlation): 0.1.4--0.a22381e
2022-11-27gn: Fix guix pull.Efraim Flashner
2022-11-16gn: Add graph-genotyper and dependent packagesEfraim Flashner
2022-11-10gn: Add pgr-tkEfraim Flashner
2022-11-07gn: Add missing crateEfraim Flashner
2022-10-24gn: Update crates for upstream changesEfraim Flashner
2022-10-11gn: (gn-rust-correlation): Update to 0.1.4-0.b82a93bFrederick Muriuki Muriithi
* gn/packages/crates-io.scm (gn-rust-correlation): 0.1.4-0.b82a93b
2022-09-30gn: Update gn-rust-correlation to 0.1.4-0.fd85c0fFrederick Muriuki Muriithi
* gn/packages/crates-io (gn-rust-correlation): Update to 0.1.4-0.fd85c0f
2022-08-15gn: gn-rust-correlation: Update to 0.1.4-0.09c579f.Frederick Muriuki Muriithi
* gn/packages/crates-io.scm (gn-rust-correlation) Update to 0.1.4-0.09c579f.
2022-08-08gn: gn-rust-correlation: Update to 0.1.4-0.3492daa.Frederick Muriuki Muriithi
* gn/packages/crates-io.scm (gn-rust-correlation) Update to 0.1.4-0.3492daa.
2022-07-22gn: Update gn-rust-correlationAlexander_Kabui
* gn/packages/crates-io.scm (commit): Update it. (source): Update hash. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2022-06-29gn: Add gn-rust-correlation.Alexander_Kabui
* gn/packages/crates-io.scm (gn-rust-correlation): New variable Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
2022-06-29gn: Add rust-gsl.Alexander_Kabui
* gn/packages/crates-io.scm (rust-gsl): New variable. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
2022-06-29gn: Add rust-gsl-sys.Alexander_Kabui
* gn/packages/crates-io.scm (rust-gsl-sys): New variable. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
2022-04-03gn: Some packages upstreamedEfraim Flashner
2022-03-31don't break guix pullEfraim Flashner
2022-03-31gn: Update gfaffix to 0.1.3Efraim Flashner
2022-01-26add notebook-toolsjgart
2022-01-26add jrepjgart
2022-01-26gn: packages: crates-io: add rust-clap-for-jrepjgart
2022-01-09gn: Unconditionally use current rust package.Efraim Flashner
2021-12-29Reference non-public rust packages using @@.Arun Isaac
rust-1.47 and rust-1.49 are no longer exported from (gnu packages rust). * gn/packages/bioinformatics.scm (gfaffix): Reference rust-1.49 using @@. * gn/packages/crates-io.scm (rust-handlegraph-0.7): Reference rust-1.47 using @@.
2021-08-19gn: make sure we use the correct rust versionEfraim Flashner
2021-08-04gn: Upstream some rust cratesEfraim Flashner
2021-08-02gn: rust-handlegraph-0.7: Update to 0.7.0-alpha.9.Efraim Flashner
2021-08-02actually update handlegraphErik Garrison
2021-08-02gn: Add gfaffix.Efraim Flashner
2020-12-15gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamedEfraim Flashner
2020-08-31rust-gfa-0.6 upstreamedEfraim Flashner
2020-08-30gn: remove upstreamed crateEfraim Flashner
2020-08-19gn: Add gfautil.Efraim Flashner
2020-08-02gn: Update crates for upstream name changesEfraim Flashner
2020-02-09gn: Upstream more crates.Efraim Flashner
2020-01-21gn: Update rust cratesEfraim Flashner
2020-01-03gn: Remove upstreamed rust packagesEfraim Flashner
2019-11-10gn: Update dependencies for rust-qtlreaper.Efraim Flashner
* gn/packages/crates.io.scm (rust-arrayvec-0.4): Update to 0.4.12. (rust-either-1.5): Update to 1.5.3. (rust-unicode-segmentation-1.6): New variable. * gn/packages/genenetwork.scm (rust-qtlreaper)[inputs]: Remove rust-unicode-segmentation-1.3, add rust-unicode-segmentation-1.6.
2019-10-27gn: Adjust to upstream crate changes.Efraim Flashner
* gn/packages/crates-io.scm: Remove upstreamed crates. * gn/packages/genenetwork.scm (rust-qtlreaper)[arguments]: Update cargo-development-inputs. Remove custom 'update-test-data phase to munge test data.
2019-10-18gn: rust-qtlreaper: Manually provide dependencies.Efraim Flashner
* gn/packages/genenetwork.scm (rust-qtlreaper)[arguments]: Manually provide all the crates needed to build the package. * gn/packages/crates.io.scm: Remove all unreferenced crates. Remove all inputs for all crates.
2019-10-07gn: Update and add some cratesEfraim Flashner
2019-10-07gn: Update some crates.Efraim Flashner
2019-09-29gn: Fixup more cratesEfraim Flashner
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