Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-07-21 | gn: Add python-whatshap | Efraim Flashner | |
2021-07-15 | gn: Provide rtg.cfg for rtg-tools. | Efraim Flashner | |
2021-07-11 | gn: Add rtg-tools | Efraim Flashner | |
* gn/packages/java.scm (rtg-tools): New variable. * gn/packages/bioinformatics (hap.py)[native-inputs]: Remove field. [inputs]: Add rtg-tools. [arguments]: Replace rtg-tools implementation. | |||
2021-07-08 | gn: Add hap.py | Efraim Flashner | |
2021-06-21 | gn: Update vg | Efraim Flashner | |
2021-05-26 | gn: Add pbmm2 | Efraim Flashner | |
2021-05-20 | gn: add bam2fastx | Efraim Flashner | |
2021-05-11 | gn: genome-browser: Fix freetype error. | Efraim Flashner | |
2021-05-06 | gn: ucsc genome browser: enable tests. | Efraim Flashner | |
2021-05-04 | gn: genome browser tests good | Efraim Flashner | |
2021-05-03 | update vg | Erik Garrison | |
2021-04-30 | gn: genome-browser: update package, service | Efraim Flashner | |
2021-04-30 | gn: genome browser: nearly have the graph working. | Efraim Flashner | |
2021-04-25 | gn: ucsc genome browser: functioning web service? | Efraim Flashner | |
2021-04-22 | gn: Initial ucsc-genome-browser and service. | Efraim Flashner | |
2021-03-04 | gn: Update vg to 1.30.0. | Efraim Flashner | |
2020-11-23 | upstream cwltools and dependant packages | Efraim Flashner | |
2020-11-10 | gn: bh20-seq-resource: Add python-twint as input | BonfaceKilz | |
* gn/packages/bioinformatics.scm (bh20-seq-resource): [propagated-input]: Add python-twint. | |||
2020-11-05 | gn: bh20-seq-resource: Add python-redis | BonfaceKilz | |
* gn/packages/bioinformatics.scm [propagated-inputs]: Add python-redis since it's required for the twitter-feed. See: https://github.com/BonfaceKilz/feedanalyser/ | |||
2020-09-06 | vg: Update to 1.26.1. | Efraim Flashner | |
2020-09-01 | update vg | Efraim Flashner | |
2020-08-30 | gn: Remove duplicate rust-gfa | Efraim Flashner | |
2020-08-30 | Add vg | Efraim Flashner | |
2020-06-28 | gn: Prepare bh20-seq-resource for service | Efraim Flashner | |
2020-06-25 | gn: Update bh20-seq-resource to 1.0-3.ae4cb3c. | Efraim Flashner | |
2020-06-25 | gn: rust-gfa: Update to 0.2.2. | Efraim Flashner | |
2020-06-16 | gn: Add rust-gfa. | Efraim Flashner | |
2020-06-16 | containerize rn6-assembly app | Efraim Flashner | |
2020-05-14 | -a | pjotrp | |
Oops | |||
2020-05-14 | bh20-seq-resource: add inputs | pjotrp | |
2020-05-14 | python-arvados-python-client: runtime dependencies. | pjotrp | |
2020-05-13 | gn: Add clustalw. | pjotrp | |
2020-05-07 | gn: grocsvs upstreamed | Efraim Flashner | |
2020-04-26 | gn: Add python-scanpy-git: 1.4.6-1.590d423 | Efraim Flashner | |
2020-04-21 | rearrange and deduplicate some packages | Efraim Flashner | |
2020-04-19 | gn: Update bh20-seq-resource. | Efraim Flashner | |
2020-04-10 | gn: Add bh20-seq-resource. | Efraim Flashner | |
2020-04-10 | gn: Add diagnostic-slider | Efraim Flashner | |
2020-03-22 | gn: Upstream edirect-gn | Efraim Flashner | |
2020-03-12 | gn: edirect-gn: Fix edirect-gn | Efraim Flashner | |
This commit does many things: Adjust for upstream update. Fix the error not allowing us to download new data. Use self-compiled binaries instead of downloading from upstream. Install more scripts. Wrap all the programs and scripts so they can work in a pureenvironment. | |||
2020-03-12 | gn: edirect-gn: Build go packages from source. | Efraim Flashner | |
2020-03-12 | gn: Add missing module import. | Efraim Flashner | |
2020-03-12 | gn: Add grocsvs and dependencies | Efraim Flashner | |
2020-03-11 | gn: singlecellrshiny: Update home-page. | Efraim Flashner | |
2020-03-05 | gn: singlecellrshiny is ready | Efraim Flashner | |
2020-03-04 | WIP: singlecellrshiny | Efraim Flashner | |
2020-03-03 | WIP: incomplete update to singlecellrshiny. | Efraim Flashner | |
2020-02-18 | gn: Update edirect-gn to match upstream update. | Efraim Flashner | |
2020-02-16 | gn: edirect-gn: Wrap more binaries | Efraim Flashner | |
2020-02-05 | gn: edirect binary seems to have been modified again | Efraim Flashner | |