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AgeCommit message (Collapse)Author
2016-05-15Disable ant - it gives an errorPjotr Prins
2016-03-30Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-23This runs with gn-stablepjotrp
2016-03-23Mergepjotrp
2016-03-23GN2 fixpjotrp
2016-03-23GN2 fixstablePjotr Prins
2016-03-23Fixed hashPjotr Prins
2016-03-18WIP: Add varscan.Roel Janssen
The JAR construction cannot contain a wild-card. That has to be fixed.
2016-03-16Add delly.Roel Janssen
2016-03-16Add contra.Roel Janssen
2016-03-11Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-11Added test suite to pindel package.Roel Janssen
2016-03-11Small compile fixes for pindelpjotrp
2016-03-10Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-10Add multiple packages.Roel Janssen
- tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib
2016-03-09Small fixedPjotr Prins
2016-03-09Added pindel without test suite.Roel Janssen
2016-03-09Added submodules to run tests, and provided an override to run the tests.Roel Janssen
2016-03-05Guix paths to the toolspjotrp
2016-03-03Fix for home-page, synopsis and description of vcflib.Roel Janssen
2016-03-03License fix for Freebayes.Roel Janssen
2016-03-02Add vcflib.Roel Janssen
2016-03-02Add FREEC.Roel Janssen
2016-03-01Use the original Makefile to statically compile lz4.Roel Janssen
2016-03-01Changed Sambamba source.Roel Janssen
2016-03-01Add freebayes.Roel Janssen
2016-03-01Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-02-29Reverted htslib for Sambamba to the repository's version.Roel Janssen
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgca: git fetchpjotrp
2016-02-28rdmd has moved into guix properpjotrp
2016-02-28Restarted r-wgcnapjotrp
2016-02-25Added a WIP FreeBayes.Roel Janssen
2016-02-24A working version for Sambamba.Roel Janssen
2016-02-23Latest Sambamba. Link failure.Roel Janssen
2016-02-23Breaks on linking in the final stages.Roel Janssen
2016-02-23Using my own fork of the Sambamba repository.Roel Janssen
2016-02-22Made it 'guix lint'-proof.Roel Janssen
2016-02-22Further rdmd refinements.Roel Janssen
2016-02-22Synchronise with upstream.Roel Janssen
2016-02-22Made rdmd-specific package from the tools repository.Roel Janssen
2016-02-22Moving genenetwork stuff into its own modulepjotrp
2016-02-21* gn/bioinformatics.scm: Sambamba using git checkout and compiles with ↵pjotrp
Makefile.guix
2016-02-21conflict resolvedpjotrp
2016-02-21Removed non-compiling packagespjotrp
2016-02-21Merge branch 'gn2'pjotrp
2016-02-20Adding pylmm to gn2pjotrp
2016-02-18Fix migration inconsistencies.Roel Janssen
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