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guix-bioinformatics
core-updates
cwl-talk
dennis
discourse-ruby-packages
elixir
fixup-guix-pull
fred
fredmanglis/production-container
gh-77990bdc/20/fredmanglis/master
gh-e9a93584/15/Brainiarc7/patch-3
gn-deploy
gn-dev
gn-latest
gn-latest-20190213
gn-latest-20190905
gn-phewas
gn-stable
gn-staging
gn1
gn2
guix-20170820-e904de7ec1789e243e830b19187b5ef550b2eefa
jupyter
ldc-wip
master
stable
update-gn3-for-production-container
wip-braker
wip-kaleido
wip-mailman
wip-ratspub
wip-ratspub-container
wip-tensorflow
Bioinformatics packages for GNU Guix
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path:
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bioinformatics.scm
Age
Commit message (
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Author
2016-09-29
Move qtlreaper to genenetwork.scm
pjotrp
2016-08-16
Updated and fixed plink-ng
gn-stable
pjotrp
2016-08-14
Getting GN2 ready for new build - plink-ng is disabled and should not be buil...
Pjotr Prins
2016-08-13
python-pil: replace with pillow
Pjotr Prins
2016-05-15
Merge branch 'gn-latest' of github.com:genenetwork/guix-bioinformatics into g...
Pjotr Prins
2016-05-15
Disable ant - it gives an error
Pjotr Prins
2016-05-11
r-biocprocesscore has been updated.
...
This should fix the genenetwork2 build issue, as noted on IRC.
Dennis E. Mungai
2016-03-30
Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics
Roel Janssen
2016-03-23
This runs with gn-stable
pjotrp
2016-03-23
Merge
pjotrp
2016-03-23
GN2 fix
pjotrp
2016-03-23
GN2 fix
stable
Pjotr Prins
2016-03-23
Fixed hash
Pjotr Prins
2016-03-18
WIP: Add varscan.
...
The JAR construction cannot contain a wild-card. That has to be fixed.
Roel Janssen
2016-03-16
Add delly.
Roel Janssen
2016-03-16
Add contra.
Roel Janssen
2016-03-11
Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics
Roel Janssen
2016-03-11
Added test suite to pindel package.
Roel Janssen
2016-03-11
Small compile fixes for pindel
pjotrp
2016-03-10
Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics
Roel Janssen
2016-03-10
Add multiple packages.
...
- tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib
Roel Janssen
2016-03-09
Small fixed
Pjotr Prins
2016-03-09
Added pindel without test suite.
Roel Janssen
2016-03-09
Added submodules to run tests, and provided an override to run the tests.
Roel Janssen
2016-03-05
Guix paths to the tools
pjotrp
2016-03-03
Fix for home-page, synopsis and description of vcflib.
Roel Janssen
2016-03-03
License fix for Freebayes.
Roel Janssen
2016-03-02
Add vcflib.
Roel Janssen
2016-03-02
Add FREEC.
Roel Janssen
2016-03-01
Use the original Makefile to statically compile lz4.
Roel Janssen
2016-03-01
Changed Sambamba source.
Roel Janssen
2016-03-01
Add freebayes.
Roel Janssen
2016-03-01
Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics
Roel Janssen
2016-02-29
Reverted htslib for Sambamba to the repository's version.
Roel Janssen
2016-02-28
r-wgcna deps
pjotrp
2016-02-28
r-wgcna deps
pjotrp
2016-02-28
r-wgcna deps
pjotrp
2016-02-28
r-wgca: git fetch
pjotrp
2016-02-28
rdmd has moved into guix proper
pjotrp
2016-02-28
Restarted r-wgcna
pjotrp
2016-02-25
Added a WIP FreeBayes.
Roel Janssen
2016-02-24
A working version for Sambamba.
Roel Janssen
2016-02-23
Latest Sambamba. Link failure.
Roel Janssen
2016-02-23
Breaks on linking in the final stages.
Roel Janssen
2016-02-23
Using my own fork of the Sambamba repository.
Roel Janssen
2016-02-22
Made it 'guix lint'-proof.
Roel Janssen
2016-02-22
Further rdmd refinements.
Roel Janssen
2016-02-22
Synchronise with upstream.
Roel Janssen
2016-02-22
Made rdmd-specific package from the tools repository.
Roel Janssen
2016-02-22
Moving genenetwork stuff into its own module
pjotrp
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