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2016-03-10Add multiple packages.Roel Janssen
- tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib
2016-03-09Added pindel without test suite.Roel Janssen
2016-03-09Added submodules to run tests, and provided an override to run the tests.Roel Janssen
2016-03-07python2-pil was missing from gn2pjotrp
2016-03-05Guix paths to the toolspjotrp
2016-03-04python-mysqlclient: propagate the shared libpjotrp
2016-03-04Merge branch 'master' of github.com:genenetwork/guix-bioinformaticspjotrp
2016-03-04GN2 is now a self contained package (except for the database)pjotrp
2016-03-04Merge pull request #8 from roelj/masterPjotr Prins
Add FREEC.
2016-03-03Fix for home-page, synopsis and description of vcflib.Roel Janssen
2016-03-03License fix for Freebayes.Roel Janssen
2016-03-03Added genenetwork2-files-smallpjotrp
2016-03-02Add vcflib.Roel Janssen
2016-03-02Add FREEC.Roel Janssen
2016-03-01Merge pull request #7 from roelj/masterPjotr Prins
An untested freebayes package description
2016-03-01Use the original Makefile to statically compile lz4.Roel Janssen
2016-03-01Changed Sambamba source.Roel Janssen
2016-03-01Add freebayes.Roel Janssen
2016-03-01Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-01gn2 updatedpjotrp
2016-03-01gn2 updatedpjotrp
2016-03-01hyphy: simplified inputs, changed licensepjotrp
2016-03-01Merge pull request #6 from Brainiarc7/masterPjotr Prins
Update this fork with Pjotr's upstream code.
2016-02-29Added hyphy.scmDennis E. Mungai
Requires a patch or substitute* clause to get working.
2016-02-29Update openfyba.scmDennis E. Mungai
2016-02-29Renamed as requestedDennis E. Mungai
Package name is in lower case.
2016-02-29OpenFYBA ready for production.Dennis E. Mungai
The package can now be pushed upstream to GNU guix. It builds successfully.
2016-02-29Reverted htslib for Sambamba to the repository's version.Roel Janssen
2016-02-29Removed obsolete reference to gccDennis E. Mungai
Not needed as an input, deprecated.
2016-02-29Show stopper: Cmake variables for glew search pathsDennis E. Mungai
A bug in Arrayfire. Submitted bug to Arrayfire, waiting for feedback. An interim patch is in the works and is being tested.
2016-02-29Fixed licensing stuff. Dennis E. Mungai
Package can now build. Tracking build dependencies.
2016-02-29OpenFYBA package: Cannot buildDennis E. Mungai
Needs to run autoreconf-ivf before the ./configure phase for the build to be successful. modify-phase statements needed.
2016-02-29Pending work: Fix Licensing stuff.Dennis E. Mungai
The build should run, though you'll run into bigger problems with licensing.
2016-02-28Update arrayfire.scmDennis E. Mungai
2016-02-28Lisp fixesDennis E. Mungai
2016-02-28Lisp specific fixes.Dennis E. Mungai
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgca: git fetchpjotrp
2016-02-28rdmd has moved into guix properpjotrp
2016-02-28Restarted r-wgcnapjotrp
2016-02-26Fix ruby errorpjotrp
2016-02-25Applied Pjotr's patch. Dennis E. Mungai
Applied Pjotr's patch.
2016-02-25Added a WIP FreeBayes.Roel Janssen
2016-02-25Merge branch 'master' of github.com:genenetwork/guix-bioinformaticspjotrp
2016-02-25Fix python-piddlepjotrp
2016-02-25Merge pull request #5 from roelj/masterPjotr Prins
Working Sambamba package.
2016-02-25Small GN databasepjotrp
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