| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2022-12-17 | Need to add service for system container | pjotrp | |
| 2022-12-17 | Parametrize GN1 | pjotrp | |
| 2022-12-17 | genenetwork1 httpd.conf parametrization | pjotrp | |
| 2022-12-17 | Update license field to stop error | pjotrp | |
| 2022-12-17 | PHP5 and GN1 | Pjotr Prins | |
| 2022-12-11 | Adding php5 to GN1 | Pjotr Prins | |
| 2022-12-11 | forward port gn1 | Pjotr Prins | |
| 2022-12-11 | Backport direct.so | Efraim Flashner | |
| 2021-03-04 | gn: Update bnw to latest version. | Efraim Flashner | |
| Update bnw and the service | |||
| 2021-02-19 | mod_python session path fix | Pjotr Prins | |
| 2021-02-15 | gn1: port | Pjotr Prins | |
| 2021-02-15 | gn1: default | Pjotr Prins | |
| 2021-02-15 | gn1: parametrize | GN1 user | |
| 2021-02-05 | gn1: parametrize source so I can use a local dir | GN1 user | |
| 2021-02-05 | gn1: make run in a container | root | |
| 2021-02-05 | Merge pull request 'Move packages to genetwork1 propagated inputs' (#11) ↵ | Pjotr Prins | |
| from Chore/Add-required-pkgs-to-gn1-inputs into master Reviewed-on: http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics/pulls/11 | |||
| 2021-02-05 | Move packages to genetwork1 propagated inputs | BonfaceKilz | |
| * gn/services/genenetwork.scm: Move some package defs to ... * gn/packages/genenetwork.scm [propagated-inputs]: ... here. | |||
| 2021-02-05 | packages: python24: Replace with ipfs file link | BonfaceKilz | |
| * gn/packages/python24.scm: (GN1-thirdparty-sources): Use ipfs link | |||
| 2021-02-03 | gn: javascript: Add javascript-font-awesome | Alexander Kabui | |
| * gn/packages/javascript.scm: (javascript-font-awesome): New package. * gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]: Add javascript-font-awesome. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> | |||
| 2021-02-03 | octopus config changes | Efraim Flashner | |
| 2021-01-31 | gn: javascript: Replace javascript-zxcvbn-async with javascript-zxcvbn | Alexander Kabui | |
| Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> | |||
| 2021-01-24 | gn: bio-vcf upstreamed | Efraim Flashner | |
| 2021-01-17 | gn: update bio-ruby | Efraim Flashner | |
| 2021-01-13 | gn: update ratspub to 0.4.5. | Efraim Flashner | |
| 2021-01-12 | gn: javascript: Add xtermjs and associated css styling | Alexanderkabui | |
| * gn/packages/javascript.scm: (javascript-xterm): New package. (javascript-xterm-style): New package. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> | |||
| 2021-01-12 | gn: services: gn1-httpd-config: Use MemorySession for sessions | BonfaceKilz | |
| See: <http://modpython.org/live/mod_python-3.3.1/doc-html/pyapi-sess-classes.html> | |||
| 2021-01-12 | gn: genenetwork1: Create "useralt" and replace "user" with it | BonfaceKilz | |
| * gn/packages/genenetwork.scm (genenetwork1): [arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to "web/webqtl/useralt" and replace how "user" is imported in "web/webqtl/main.py" | |||
| 2021-01-12 | gn: services: gn1-httpd-config: Replace SetHandler with AddHandler | BonfaceKilz | |
| * gn/services/gn1-httpd-config.scm (GN1-httpd-config): Use "AddHandler mod_python .py". This allows all python modules and submodules to be loaded by modpython. | |||
| 2021-01-12 | gn: services: gn1-httpd-config: Change document root to "/web/" | BonfaceKilz | |
| 2021-01-12 | gn: services: gn1-httpd-config: Make apache display static content | BonfaceKilz | |
| Static content here is: images, javascript and CSS. * gn/services/gn1-httpd-config.scm (GNI-httpd-config): Add extra apache directive for showing images, javascript, and CSS. | |||
| 2021-01-09 | ruby-redis: new | pjotrp | |
| 2021-01-09 | gemma: revert to latest | pjotrp | |
| 2021-01-09 | fix | pjotrp | |
| 2020-12-21 | gn: genenetwork1 service: Factor out httpd config. | Efraim Flashner | |
| 2020-12-17 | gn: lizardfs: Update package | Efraim Flashner | |
| 2020-12-17 | gn: python-twint: Patch Token class in order to get refreshTokens | BonfaceKilz | |
| * gn/packages/twint.scm [patches]: Add python-twint-token.patch. * python-twint-token.patch: New file. | |||
| 2020-12-16 | gn: javascript: Update javascript-underscore to 1.12.0 | BonfaceKilz | |
| 2020-12-16 | Updated gemma | pjotrp | |
| 2020-12-15 | octopus: Add lizardfs service | Efraim Flashner | |
| 2020-12-15 | Update gemma-gn2 | pjotrp | |
| 2020-12-15 | Updated gemma package for GN2 | pjotrp | |
| 2020-12-15 | Try htslib with codecs | pjotrp | |
| 2020-12-15 | Remove stuff that is in trunk | pjotrp | |
| 2020-12-15 | gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamed | Efraim Flashner | |
| 2020-12-15 | gn: javascript: Use correct datatable-scroller library | Alexanderkabui | |
| * gn/packages/javascript.scm (javascript-datatables-scroller): Update to 2.0.3. [propagated-inputs]: Add javascript-datatables-scroller-style. [synopsis]: Update it. (javascript-datatables-scroller-style): New package. Signed-off-by: BonfaceKilz <bonfacemunyoki@gmail.com> | |||
| 2020-12-07 | gn: modularize slurm service | Efraim Flashner | |
| 2020-12-06 | gn: python3-genenetwork2: Generate svg graph from python3-package | BonfaceKilz | |
| * gn/packages/genenetwork.scm (python3-genenetwork2): [native-inputs]: Add graphviz. [arguments]{generate-dag-svg-file}: New phase. | |||
| 2020-12-06 | gn: python3-genenetwork2: Remove unnecessary begin form | BonfaceKilz | |
| * gn/packages/genenetwork.scm (python3-genenetwork2): [arguments] {generate-graph}: Remove begin form. | |||
| 2020-12-06 | gn: fix module imports | Efraim Flashner | |
| 2020-12-04 | gn: python3-genenetwork2: Generate graph from python3-package | BonfaceKilz | |
| * gn/packages/genenetwork.scm: Add new #:use-modules: (guix graph) (guix scripts graph) (guix store) (python3-genenetwork2)[arguments]{generate-graph}: New phase after install that uses d3js to generate a new graph which uses d3js as a backend. | |||
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
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