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2018-07-14Update dependencies for building gemmapjotrp
2018-07-13GEMMA devPjotr Prins
2018-07-13gemma-dev scriptpjotrp
2018-06-30gn: Add edashMuriithi Frederick Muriuki
* gn/packages/edash.scm (python-s3transfer-0.1.13): New variable * gn/packages/edash.scm (python-botocore-1.10.48): New variable * gn/packages/edash.scm (python-boto3): New variable * gn/packages/edash.scm (edash): New variable
2018-06-30Ignore editor temporary filesMuriithi Frederick Muriuki
2018-06-30Merge branch 'master' of gitlab.com:fredmanglis/guix-bioinformaticsMuriithi Frederick Muriuki
* Merge changes to genenetwork3 package.
2018-06-28Update reaper commitMuriithi Frederick Muriuki
2018-06-26Updated python-elasticsearchpjotrp
2018-06-26Ruby ES supportpjotrp
2018-06-21Add python-reaperMuriithi Frederick Muriuki
* gn/packages/genenetwork.scm (python-reaper): New package.
2018-06-11Remove PhewasMuriithi Frederick Muriuki
* Phewas depends on an R package that no longer exists at the given url. This breaks the install. Phewas is also not currently used in genenetwork3.
2018-04-08Merge branch 'master' of https://gitlab.com/genenetwork/guix-bioinformaticsMuriithi Frederick Muriuki
2018-04-06Oops, wrong packagePjotr Prins
2018-04-06Two JS packagespjotrp
2018-04-05Added cytoscape-js packagepjotrp
2018-04-04gn: Add package dependenciesMuriithi Frederick Muriuki
* gn/packages/genenetwork.scm (genenetwork3): - Add dependency python-cssselect - Add dependency python-htmlgen
2018-04-04gn: Add new packageMuriithi Frederick Muriuki
* gn/packages/python.scm (python-htmlgen): New variable.
2018-03-26Deactivate python 2Muriithi Frederick Muriuki
* With move to genenetwork3, we'll be using Python3, so forcing Python2 is no longer necessary.
2018-03-26gn: Update genenetwork3 definitionMuriithi Frederick Muriuki
* gn/packages/genenetwork.scm (genenetwork3): Update package definition. - Deactivate all packages that need Python 2 - Change the source uri for the package definition - Change the commit hash - Change the sha256 hash - Comment out the processing for pylmmcmd in the 'fix-paths' phase
2018-03-22Added qtlreaper for Python3fredpjotrp
2018-03-21gn: genenetwork3: Add new packageMuriithi Frederick Muriuki
* gn/packages/genenetwork.scm (genenetwork3): Add a new package
2018-03-20Adding GN python packages for testingpjotrp
2018-02-15Using elasticsearch latestpjotrp
2018-02-11eventlet added to gunicornPjotr Prins
2018-02-10Added requests and mechanize for testingPjotr Prins
2018-02-10Updated gemma-wrapperpjotrp
2018-01-30Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformaticsPjotr Prins
2018-01-30Openblas universalPjotr Prins
2018-01-30Gunicorn support with inotifypjotrp
2018-01-30Gunicorn with inotifypjotrp
2018-01-29Updatespjotrp
2018-01-04gseaPjotr Prins
2017-12-27Added build for faster-lmm-d; moved gsl1pjotrp
2017-12-27Disable testsPjotr Prins
2017-12-27Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformaticspjotrp
2017-12-27GEMMA build for generic releasepjotrp
2017-12-27gemma: provide generic packagepjotrp
2017-12-20Updated Twitter fetcherPjotr Prins
2017-12-20Fixed Rpy2Pjotr Prins
2017-12-19GN2 bumpPjotr Prins
2017-12-19OpenBlasPjotr Prins
2017-12-19OpenBlasPjotr Prins
2017-12-19Openblas worksPjotr Prins
2017-12-19OpenblasPjotr Prins
2017-12-18Blas testingPjotr Prins
2017-12-18Fixes against guix latestPjotr Prins
2017-12-18Disable tests for RPy2Pjotr Prins
2017-12-18Openblaspjotrp
2017-12-10LDCpjotrp
2017-12-10ldc: patchingpjotrp
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