Age | Commit message (Collapse) | Author | |
---|---|---|---|
2021-08-16 | openssl-1.0 deprecated upstream, moved to guix-past | Efraim Flashner | |
2021-08-15 | gn: genenetwork2: Don't hardcode python version. | Efraim Flashner | |
2021-08-12 | gn: genenetwork: Remove "#:python ,python-wrapper" from "arguments" | BonfaceKilz | |
This fixes this error: guix package: error: /home/bonface/projects/guix-bioinformatics/gn/packages/genenetwork.scm:295:4: package `genenetwork2@3.11-guix-84cbf35' has an invalid input: ("python" python-wrapper) | |||
2021-08-12 | gn: Update gitea to 1.14.6. | Efraim Flashner | |
2021-08-11 | gn: fix genenetwork2 package definition | Efraim Flashner | |
2021-08-11 | gn: Add pirs. | Efraim Flashner | |
2021-08-11 | gn: Add pbsim2. | Efraim Flashner | |
2021-08-11 | gn: Add pangenie. | Efraim Flashner | |
2021-08-11 | fixup genenetwork2 | Efraim Flashner | |
2021-08-09 | gn: Adjust genenetwork2 for removal of python2-genenetwork2 | Efraim Flashner | |
2021-08-07 | gemma.scm: muck out old stuff | pjotrp | |
2021-08-07 | python2-genenetwork2: remove unused Python2 version of genenetwork | pjotrp | |
2021-08-07 | shunit2: rename to shunit2-old, so as not to conflict with upstream | pjotrp | |
2021-08-05 | gn: Update genenetwork3 to 0.0.1-guix-487e50e | BonfaceKilz | |
2021-08-04 | gn: Upstream some rust crates | Efraim Flashner | |
2021-08-03 | gn: genenetwork3: Add csvdiff as a propagated input | BonfaceKilz | |
2021-08-02 | clarify that this is an old seqwish | Erik Garrison | |
2021-08-02 | gn: gfaffix: Don't hardcode rust-handlegraph package version | Efraim Flashner | |
2021-08-02 | gn: rust-handlegraph-0.7: Update to 0.7.0-alpha.9. | Efraim Flashner | |
2021-08-02 | actually update handlegraph | Erik Garrison | |
2021-08-02 | get bugfix in rs-handlegraph | Erik Garrison | |
2021-08-02 | gn: code updates | Efraim Flashner | |
2021-08-02 | gn: Add gfaffix. | Efraim Flashner | |
2021-08-01 | code updates | Efraim Flashner | |
2021-08-01 | gn: Adjust python-whatshap for upstream changes | Efraim Flashner | |
2021-07-31 | ldc: build is fine; tests fail | pjotrp | |
2021-07-21 | gn: Add python-whatshap | Efraim Flashner | |
2021-07-20 | gn: golang: Add csv fast diffing tool | BonfaceKilz | |
2021-07-15 | gn: Provide rtg.cfg for rtg-tools. | Efraim Flashner | |
2021-07-12 | gn: Add ccwl. | Efraim Flashner | |
* gn/packages/ccwl.scm (ccwl): New variable. | |||
2021-07-12 | gn: Update genenetwork3 to 0.0.1-guix-7d22039 | BonfaceKilz | |
2021-07-11 | gn: Add rtg-tools | Efraim Flashner | |
* gn/packages/java.scm (rtg-tools): New variable. * gn/packages/bioinformatics (hap.py)[native-inputs]: Remove field. [inputs]: Add rtg-tools. [arguments]: Replace rtg-tools implementation. | |||
2021-07-11 | gn: Add python24-direct. | Efraim Flashner | |
* gn/packages/python24.scm (python24-direct): New variable. * gn/packages/genenetwork.scm (genenetwork1)[propagated-inputs]: Add python24-direct. | |||
2021-07-11 | gemma-wrapper: update to 0.99.1 | Pjotr Prins | |
2021-07-11 | gemma-wrapper: add GNU parallel | Pjotr Prins | |
2021-07-11 | Added GNU parallel to genenetwork2 | pjotrp | |
2021-07-08 | gn: Add hap.py | Efraim Flashner | |
2021-07-05 | gn: Add genecup-HEAD. | Efraim Flashner | |
2021-07-04 | gn: julia-categoricalarrays upstreamed | Efraim Flashner | |
2021-07-02 | gn: genecup: Update to 1.5. | Efraim Flashner | |
2021-07-01 | gn: genecup: Update to 1.4. | Efraim Flashner | |
2021-06-30 | gemma-dev: upgrade | pjotrp | |
2021-06-30 | Add ruby-mustermann | pjotrp | |
2021-06-30 | python gone missing conflict ;) | pjotrp | |
2021-06-29 | gn: Update julia packages | Efraim Flashner | |
2021-06-21 | gn: Update vg | Efraim Flashner | |
2021-06-18 | python-rpy2-next: Update to 3.4.5 | BonfaceKilz | |
2021-06-14 | gn: julia packages upstreamed | Efraim Flashner | |
2021-06-14 | gn: qtbase renamed to qtbase-5 | Efraim Flashner | |
2021-06-13 | gn: Julia packaging | Efraim Flashner | |