aboutsummaryrefslogtreecommitdiff
AgeCommit message (Collapse)Author
2021-06-07gn: Update genenetwork3 to 0.0.1-guix-3881b50BonfaceKilz
2021-06-06genecup: update to 1.2.Efraim Flashner
2021-06-06genecup: update to 1.1.Efraim Flashner
2021-05-31gn: Upstream julia librariesEfraim Flashner
2021-05-30gn: comment out unpackaged inputsEfraim Flashner
2021-05-30gn: Upstream julia librariesEfraim Flashner
2021-05-29ruby-regressiontestpjotrp
2021-05-27gn: upstream some librariesEfraim Flashner
2021-05-27gn: genecup testingEfraim Flashner
2021-05-27gn: Update genenetwork3 to 0.0.1-guix-cd08b40BonfaceKilz
2021-05-26gn: Add pbmm2Efraim Flashner
2021-05-25gn: visuals more progressEfraim Flashner
2021-05-24gn: visuals webservice proof-of-conceptEfraim Flashner
2021-05-23gn: more julia packagesEfraim Flashner
2021-05-23gn: more julia packagesEfraim Flashner
2021-05-20gn: more julia packagesEfraim Flashner
2021-05-20gn: add bam2fastxEfraim Flashner
2021-05-18gn: More julia packagesEfraim Flashner
2021-05-16gn: More julia packagesEfraim Flashner
2021-05-14gn: Add julia packagesEfraim Flashner
2021-05-13gn: new julia packagesEfraim Flashner
2021-05-13gn: python-sqlalchemy-stubs is upstream.Efraim Flashner
2021-05-13gn: Update genenetwork3 to 0.0.1-guix-09f6992BonfaceKilz
2021-05-13genenetwork2: add python-configparserPjotr Prins
2021-05-13gn: Add r-qtl, r-stringi to genenetwork3.BonfaceKilz
* gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add r-qtl and r-stringi.
2021-05-12Add guix pull versionPjotr Prins
2021-05-12Made python3-genenetwork2 the default!Pjotr Prins
2021-05-12Moved racketPjotr Prins
2021-05-12gn: Add r-optparse to genenetwork3BonfaceKilz
* gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add r-optparse
2021-05-11gn: upstream 2 gemsEfraim Flashner
2021-05-11gn: genome-browser: use database on penguin2Efraim Flashner
2021-05-11gn: genome-browser: Fix freetype error.Efraim Flashner
2021-05-10gn: genenetwork: Add genenetwork3 as input.BonfaceKilz
* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: Add genenetwork3.
2021-05-10gn: genenetwork: Remove racket-minimal from gn2 inputs.BonfaceKilz
* gn/packages/genenetwork.scm [propagated-inputs]: Remove racket-minimal.
2021-05-10gn: genenetwork: Add genenetwork3.BonfaceKilz
* gn/packages/genenetwork.scm (genenetwork3): New variable.
2021-05-10gn: genenetwork: Add autopep8 and pylint to python3-genenetwork2.BonfaceKilz
* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: Add python-autopep8 and python-pylint.
2021-05-06gn: ucsc genome browser: enable tests.Efraim Flashner
2021-05-04gn: genome browser tests goodEfraim Flashner
2021-05-03Merge pull request 'update vg' (#12) from ekg/guix-bioinformatics:master ↵Erik Garrison
into master Reviewed-on: http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics/pulls/12
2021-05-03update vgErik Garrison
2021-04-30gn: genome-browser: update package, serviceEfraim Flashner
2021-04-30gn: genome browser: nearly have the graph working.Efraim Flashner
2021-04-30Remove book module which is obsoletePjotr Prins
2021-04-26gn: Upstream 2 ruby gemsEfraim Flashner
2021-04-26Merge branch 'discourse-ruby-packages'Efraim Flashner
2021-04-25gn: ucsc genome browser: functioning web service?Efraim Flashner
2021-04-23gn: python: Add python2-werkzeug.BonfaceKilz
* gn/packages/python.scm (python2-werkzeug): New variable. This was deprecated upstream.
2021-04-23gn: python: Add python2-flaskBonfaceKilz
* gn/packages/python.scm: New variable. This was deprecated upstream.
2021-04-22gn: Initial ucsc-genome-browser and service.Efraim Flashner
2021-04-20gn: genetwork: Propagate python-rpy2-nextBonfaceKilz
* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: Use python-rpy2-next.