| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2016-03-09 | Merge branch 'master' of github.com:roelj/guix-bioinformatics into roelj | Pjotr Prins | |
| 2016-03-09 | Added pindel without test suite. | Roel Janssen | |
| 2016-03-09 | Added submodules to run tests, and provided an override to run the tests. | Roel Janssen | |
| 2016-03-08 | Merge branch 'master' of github.com:Brainiarc7/guix-bioinformatics into dennis | Pjotr Prins | |
| 2016-03-08 | Change license handling | Dennis E. Mungai | |
| Still fails to build. Obscure ruby error. | |||
| 2016-03-08 | Package now builds on GNU Guix | Dennis E. Mungai | |
| All done. | |||
| 2016-03-08 | Wrong hash, correct on build | Dennis E. Mungai | |
| Tertiary OpenCL headers package. | |||
| 2016-03-08 | Notes: Requires OpenCL headers to build. | Dennis E. Mungai | |
| Port Khronos OpenCL headers to guix before building this package. | |||
| 2016-03-08 | Add Khronos OpenCL ICD | Dennis E. Mungai | |
| Ported to guix. | |||
| 2016-03-08 | Add ocl-icd package to GNU Guix | Dennis E. Mungai | |
| Added the Opensource reference OpenCL ICD, a dependency for Arrayfire and other OpenCL runtimes on GNU Guix | |||
| 2016-03-07 | Added transitional package llvm-3.7.1 | Dennis E. Mungai | |
| Needed by POCL, version bumped. | |||
| 2016-03-07 | Add clang-runtime as a dependency. | Dennis E. Mungai | |
| 2016-03-07 | python2-pil was missing from gn2 | pjotrp | |
| 2016-03-05 | Guix paths to the tools | pjotrp | |
| 2016-03-04 | Updated hash values. | Dennis E. Mungai | |
| Changed with new commits to Arrayfire. | |||
| 2016-03-04 | Bumped up to v.3.3.1-hotfix. | Dennis E. Mungai | |
| Fixes a bunch of build bugs | |||
| 2016-03-04 | Add afnumpy to guix | Dennis E. Mungai | |
| afnumpy is a GPGPU - accelerated drop-in to numpy | |||
| 2016-03-04 | python-mysqlclient: propagate the shared lib | pjotrp | |
| 2016-03-04 | Merge branch 'master' of github.com:genenetwork/guix-bioinformatics | pjotrp | |
| 2016-03-04 | GN2 is now a self contained package (except for the database) | pjotrp | |
| 2016-03-04 | Merge pull request #8 from roelj/master | Pjotr Prins | |
| Add FREEC. | |||
| 2016-03-03 | Fix for home-page, synopsis and description of vcflib. | Roel Janssen | |
| 2016-03-03 | License fix for Freebayes. | Roel Janssen | |
| 2016-03-03 | Added genenetwork2-files-small | pjotrp | |
| 2016-03-03 | Switch to cmake build system. | Dennis E. Mungai | |
| 2016-03-02 | Add and port the Portable OpenCL package to guix | Dennis E. Mungai | |
| This is the POCL port to guix. It provides an open source , vendor neutral OpenCL ICD (Installable Client Driver), suitable for testing as a reference OpenCL platform. Regards, Brainiarc7. | |||
| 2016-03-02 | Add vcflib. | Roel Janssen | |
| 2016-03-02 | Add FREEC. | Roel Janssen | |
| 2016-03-01 | Merge pull request #7 from roelj/master | Pjotr Prins | |
| An untested freebayes package description | |||
| 2016-03-01 | Use the original Makefile to statically compile lz4. | Roel Janssen | |
| 2016-03-01 | Changed Sambamba source. | Roel Janssen | |
| 2016-03-01 | Add freebayes. | Roel Janssen | |
| 2016-03-01 | Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics | Roel Janssen | |
| 2016-03-01 | Added glfw guix package | Dennis E. Mungai | |
| This is an open source, multi-platform library for creating windows with OpenGL contexts and receiving inputs and events. A common pipeline for applications such as Arrayfire that require access to OpenGL-OpenCL interops on multiple platforms. | |||
| 2016-03-01 | Merge pull request #3 from genenetwork/master | Dennis E. Mungai | |
| Pull in Pjotr's changes. | |||
| 2016-03-01 | gn2 updated | pjotrp | |
| 2016-03-01 | gn2 updated | pjotrp | |
| 2016-03-01 | hyphy: simplified inputs, changed license | pjotrp | |
| 2016-03-01 | Merge pull request #6 from Brainiarc7/master | Pjotr Prins | |
| Update this fork with Pjotr's upstream code. | |||
| 2016-02-29 | Added hyphy.scm | Dennis E. Mungai | |
| Requires a patch or substitute* clause to get working. | |||
| 2016-02-29 | Update openfyba.scm | Dennis E. Mungai | |
| 2016-02-29 | Renamed as requested | Dennis E. Mungai | |
| Package name is in lower case. | |||
| 2016-02-29 | OpenFYBA ready for production. | Dennis E. Mungai | |
| The package can now be pushed upstream to GNU guix. It builds successfully. | |||
| 2016-02-29 | Reverted htslib for Sambamba to the repository's version. | Roel Janssen | |
| 2016-02-29 | Removed obsolete reference to gcc | Dennis E. Mungai | |
| Not needed as an input, deprecated. | |||
| 2016-02-29 | Show stopper: Cmake variables for glew search paths | Dennis E. Mungai | |
| A bug in Arrayfire. Submitted bug to Arrayfire, waiting for feedback. An interim patch is in the works and is being tested. | |||
| 2016-02-29 | Fixed licensing stuff. | Dennis E. Mungai | |
| Package can now build. Tracking build dependencies. | |||
| 2016-02-29 | OpenFYBA package: Cannot build | Dennis E. Mungai | |
| Needs to run autoreconf-ivf before the ./configure phase for the build to be successful. modify-phase statements needed. | |||
| 2016-02-29 | Pending work: Fix Licensing stuff. | Dennis E. Mungai | |
| The build should run, though you'll run into bigger problems with licensing. | |||
| 2016-02-28 | Update arrayfire.scm | Dennis E. Mungai | |
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index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
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