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-rw-r--r--gn/packages/bnw.scm2
-rw-r--r--gn/packages/genenetwork.scm2
-rw-r--r--gn/packages/graphviz.scm42
3 files changed, 2 insertions, 44 deletions
diff --git a/gn/packages/bnw.scm b/gn/packages/bnw.scm
index 043077d..bdcaeb0 100644
--- a/gn/packages/bnw.scm
+++ b/gn/packages/bnw.scm
@@ -6,7 +6,7 @@
#:use-module (gnu packages gcc)
#:use-module (gnu packages python)
#:use-module (gnu packages statistics)
- #:use-module (gn packages graphviz)
+ #:use-module (past packages graphviz)
#:use-module (gn packages javascript)
#:use-module (gn packages maths)
#:use-module (gn packages python)
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 7925bd5..e529ff8 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -31,13 +31,13 @@
#:use-module (gnu packages web)
#:use-module (gnu packages wget)
#:use-module (gnu packages xml)
+ #:use-module (past packages graphviz)
#:use-module (past packages python)
#:use-module (gn packages bioinformatics)
#:use-module (gn packages twint)
#:use-module (gn packages crates-io)
#:use-module (gn packages elixir)
#:use-module (gn packages gemma)
- #:use-module (gn packages graphviz)
#:use-module (gn packages javascript)
#:use-module (gn packages phewas)
#:use-module (gn packages python)
diff --git a/gn/packages/graphviz.scm b/gn/packages/graphviz.scm
deleted file mode 100644
index 22a8959..0000000
--- a/gn/packages/graphviz.scm
+++ /dev/null
@@ -1,42 +0,0 @@
-(define-module (gn packages graphviz)
- #:use-module ((guix licenses) #:prefix license:)
- #:use-module (guix packages)
- #:use-module (guix download)
- #:use-module (guix utils)
- #:use-module (gnu packages gl)
- #:use-module (gnu packages graphviz)
- #:use-module (gnu packages gtk)
- #:use-module (srfi srfi-1))
-
-(define-public graphviz-2.26
- (package
- (inherit graphviz)
- (name "graphviz")
- (version "2.26.3")
- (outputs '("out"))
- (source
- (origin
- (method url-fetch)
- (uri (string-append
- ;; TODO: Replace with official release
- "mirror://debian/pool/main/g/graphviz/"
- "graphviz_" version ".orig.tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "18bzyg17ni0lpcd2g5dhan8fjv3vzkjym38jq8vm42did5p9j47l"))))
- ;; TODO: unbundle libraries?
- (arguments
- `(#:configure-flags '("--enable-swig=no")
- ,@(substitute-keyword-arguments (package-arguments graphviz)
- ((#:phases phases)
- `(modify-phases ,phases
- (delete 'move-docs) ; one output
- (delete 'move-guile-bindings))))))
- (inputs
- ;; TODO(?): Add perl, guile@1.8, gtk@2, lua5.1, tcl8.[3-6], rsvg, python-2.4
- `(("gdk-pixbuf" ,gdk-pixbuf)
- ("freeglut" ,freeglut)
- ,@(fold alist-delete (package-inputs graphviz)
- '("libjpeg-turbo" "guile" "swig"))))
- (license license:cpl1.0)))