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-rw-r--r--gn/packages/arrayfire.scm350
1 files changed, 166 insertions, 184 deletions
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm
index 723444a..6a7c07f 100644
--- a/gn/packages/arrayfire.scm
+++ b/gn/packages/arrayfire.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -19,235 +20,216 @@
(define-module (gn packages arrayfire)
#:use-module (guix packages)
#:use-module ((guix licenses) #:prefix license:)
- #:use-module (guix download)
#:use-module (guix git-download)
- #:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (gnu packages)
#:use-module (guix utils)
#:use-module (gnu packages algebra)
- #:use-module (gnu packages autotools)
- #:use-module (gnu packages bootstrap)
- #:use-module (gnu packages compression)
- #:use-module (gnu packages curl)
- #:use-module (gnu packages gawk)
- #:use-module (gnu packages cmake)
#:use-module (gnu packages boost)
- #:use-module (gnu packages glib)
- #:use-module (gnu packages image)
- #:use-module (gnu packages video)
- #:use-module (gnu packages textutils)
- ;; #:use-module (gnu packages fftw)
- ;; #:use-module (gnu packages fftw-openmpi) - in algebra
- ;; #:use-module (gnu packages fftwf)
- #:use-module (gnu packages gl)
+ #:use-module (gnu packages check)
#:use-module (gnu packages gcc)
- #:use-module (gnu packages gnupg)
- #:use-module (gnu packages pkg-config)
#:use-module (gnu packages maths)
- #:use-module (gnu packages mpi)
- #:use-module (gnu packages web)
- #:use-module (gnu packages wget)
- #:use-module (gnu packages python)
- #:use-module (gnu packages ruby)
- #:use-module (gnu packages xorg)
- #:use-module (gnu packages version-control)
- #:use-module (gnu packages linux)
- #:use-module (gnu packages opencl))
+ #:use-module (gnu packages opencl)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages python))
(define-public arrayfire
(package
(name "arrayfire")
- (version "3.3.1")
+ (version "3.3.2")
(source (origin
- (method url-fetch)
- (uri (string-append "http://arrayfire.com/arrayfire_source/arrayfire-full-" version
- ".tar.bz2"))
- (file-name (string-append name "-" version ".tar.bz2"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/arrayfire/arrayfire.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32
- "045adww6dqmyz6kkfmq7xawi5v9a894yp5j9pzn6j568gi48pyqc"))))
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("gawk" ,gawk)
- ("git" ,git)
- ("glew" ,glew)
- ("libtool" ,libtool)
- ("pkg-config" ,pkg-config)))
- (inputs `(("boost" ,boost)
- ("glfw" ,glfw)
- ("compute" ,compute)
- ("curl" ,curl)
+ "113ldnqsil4p84sayv7jh8vnn0nalxibhdyvvwp94vqk20kqg4lw"))
+ (patches (search-patches "arrayfire-lapack-detection.patch"
+ "arrayfire-newer-boost-compute.patch"))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("googletest" ,googletest)
+ ("assets" ,(origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/arrayfire/assets.git")
+ (commit "729c7b64039e6433ae5ee521658ba20147efcb02"))) ; March 4, 2019
+ (file-name (git-file-name "arrayfire-assets" "submodule"))
+ (sha256
+ (base32
+ "05zg7m6zlwi3llbv7l5wd9qi9ppb9p3ad2i5xmqwvcbgx5ry4l2s"))))
+ ("threads" ,(origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/alltheflops/threads.git")
+ (commit "5e778ce0a7f0f80af9d32ea3569df3dbec834f59"))) ; Dec 16, 2015
+ (file-name (git-file-name "arrayfire-threads" "submodule"))
+ (sha256
+ (base32
+ "1rj2357r124b4ry0s467fz9hs4jxcyacliwprggvai85a39pqabx"))))))
+ (inputs
+ `(("boost" ,boost)
("clBLAS" ,clBLAS)
("clFFT" ,clFFT)
- ("atlas" ,atlas)
- ("dbus" ,dbus)
- ("opencl-headers" ,opencl-headers)
- ("ocl-icd" ,ocl-icd)
- ("enca" ,enca)
- ("eudev" ,eudev)
- ("glew" ,glew)
- ("glib" ,glib)
- ("lapack" ,lapack)
- ("scalapack" ,scalapack)
- ("libcap" ,libcap)
- ("libjpeg" ,libjpeg)
- ("libltdl" ,libltdl)
- ("libtiff" ,libtiff)
- ("libyajl" ,libyajl)
- ("mesa-utils" ,mesa-utils)
- ("python" ,python-2)
- ("freeimage" ,freeimage)
- ("freeglut" ,freeglut)
- ("fftw" ,fftw)
- ("fftwf" ,fftwf)
("fftw-openmpi" ,fftw-openmpi)
- ("glew" ,glew)
- ("glu" ,glu)
+ ("fftwf" ,fftwf)
+ ("ocl-icd" ,ocl-icd)
("openblas" ,openblas)
- ("wget" ,wget)
- ("cmake" ,cmake)))
+ ("opencl-headers" ,opencl-headers)))
(build-system cmake-build-system)
(arguments
- `(#:configure-flags '("-DBUILD_OPENCL=ON" "-DBUILD_CUDA=OFF" "-DBUILD_GRAPHICS=OFF" "-DUSE_SYSTEM_BOOST_COMPUTE=ON" "-DUSE_SYSTEM_CLBLAS=ON" "-DUSE_SYSTEM_CLFFT=ON")
- #:tests? #t))
- (synopsis "ArrayFire: a general purpose GPU library. https://arrayfire.com")
- (description "ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple.Now on Guix")
- (home-page "http://arrayfire.com/")
- (license (list license:gpl2
- license:gpl2+
- license:gpl3
- license:gpl3+))))
+ `(#:configure-flags
+ '("-DBUILD_OPENCL=ON"
+ "-DBUILD_CUDA=OFF"
+ "-DBUILD_GRAPHICS=OFF"
+ "-DBUILD_TEST=OFF" ; building tests segfaults
+ "-DUSE_SYSTEM_CLBLAS=ON"
+ "-DUSE_SYSTEM_CLFFT=ON"
+ "-DUSE_SYSTEM_GTEST=ON")
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'add-more-sources
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((assets (assoc-ref inputs "assets"))
+ (threads (assoc-ref inputs "threads")))
+ (copy-recursively assets "assets")
+ (copy-recursively threads "src/backend/cpu/threads"))
+ #t))
+ (add-after 'unpack 'fix-sources
+ (lambda _
+ (substitute* "src/backend/opencl/blas.cpp"
+ ;; https://github.com/arrayfire/arrayfire/commit/90a9ffbce5c38352a365e03a634ffaf0d2fb9933
+ (("#undef BLAS_FUNC_DEF")
+ "#undef BLAS_FUNC_DEF\n#undef BLAS_FUNC"))
+ (substitute* '("src/backend/cpu/blas.cpp"
+ "src/backend/opencl/cpu/cpu_blas.cpp")
+ ;; https://github.com/arrayfire/arrayfire/pull/2538/files
+ (("&cblas_##PREFIX##FUNC;")
+ "(FUNC##_func_def<TYPE>)&cblas_##PREFIX##FUNC;"))
+ #t)))
+ #:tests? #f)) ; Building the tests fail linking, so we build the examples as a test.
+ (home-page "https://arrayfire.com/")
+ (synopsis "High performance library for parallel computing")
+ (description
+ "ArrayFire is a high performance software library for parallel computing
+with an easy-to-use API. Its array based function set makes parallel
+programming simple.")
+ (license (list license:bsd-3 ; everything except CMakeModules folder
+ license:cc0)))) ; assets
(define-public clBLAS
(package
(name "clBLAS")
- (version "v2.10")
+ (version "2.12")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/clMathLibraries/clBLAS/archive/"
- version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/clMathLibraries/clBLAS.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32
- "0adlb02lqzrklfybhnv4n0p37mvkvdi3vqiwa05x2mv05ywnr93j"))))
+ "154mz52r5hm0jrp5fqrirzzbki14c1jkacj75flplnykbl36ibjs"))))
(build-system cmake-build-system)
- (arguments `(#:tests? #f
- #:configure-flags '("../clBLAS-2.10/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release" "-DBUILD_TEST=OFF")))
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("cmake" ,cmake)
- ("gfortran" ,gfortran)
- ("libtool" ,libtool)
- ("pkg-config" ,pkg-config)))
- (inputs `(("curl" ,curl)
- ("dbus" ,dbus)
- ("boost" ,boost)
- ("enca" ,enca)
- ("eudev" ,eudev)
- ("fftw-openmpi" ,fftw-openmpi)
- ("glew" ,glew)
- ("libcap" ,libcap)
- ("libjpeg" ,libjpeg)
- ("libltdl" ,libltdl)
- ("libtiff" ,libtiff)
- ("mesa-utils" ,mesa-utils)
- ("openmpi" ,openmpi)
- ("ocl-icd" ,ocl-icd)
+ (arguments
+ `(#:tests? #f
+ #:configure-flags
+ (list "../source/src"
+ "-DUSE_SYSTEM_GTEST=ON"
+ ;"-DBoost_USE_STATIC_LIBS=OFF" ; this does not seem to apply
+ "-DBUILD_TEST=OFF")
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-source
+ (lambda _
+ (substitute* "src/CMakeLists.txt"
+ (("Boost_USE_STATIC_LIBS ON")
+ "Boost_USE_STATIC_LIBS OFF"))
+ #t)))))
+ (native-inputs
+ `(("gfortran" ,gfortran)
+ ("openblas" ,openblas)
("opencl-headers" ,opencl-headers)
- ("randrproto" ,randrproto)
- ("libxrandr" ,libxrandr)
- ("xineramaproto" ,xineramaproto)
- ("libxinerama" ,libxinerama)
- ("libxcursor" ,libxcursor)
("python" ,python-2)))
- (home-page "http://www.glfw.org/")
- (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (license (list license:gpl2))))
+ (inputs
+ `(("boost" ,boost)
+ ("ocl-icd" ,ocl-icd)))
+ (home-page "https://github.com/clMathLibraries/clBLAS")
+ (synopsis "Library containing BLAS functions written in OpenCL")
+ (description
+ "The primary goal of @code{clBLAS} is to make it easier for developers to
+utilize the inherent performance and power efficiency benefits of heterogeneous
+computing. @code{clBLAS} interfaces do not hide nor wrap @code{OpenCL}
+interfaces, but rather leaves @code{OpenCL} state management to the control of
+the user to allow for maximum performance and flexibility. The @code{clBLAS}
+library does generate and enqueue optimized @code{OpenCL} kernels, relieving the
+user from the task of writing, optimizing and maintaining kernel code themselves.")
+ (license license:asl2.0)))
(define-public clFFT
(package
(name "clFFT")
- (version "v2.10.1")
+ (version "2.10.1")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/clMathLibraries/clFFT/archive/"
- version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/clMathLibraries/clFFT.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32
- "19hrk1lf06kch8x9dpbdj0waycn2mldrmj2y4vzi7zn2gdfw6g73"))))
+ "1ksmcsqf25bmaq9rr2z1m936mxgh9cx6can2l7nna4mzlj0aghrs"))))
(build-system cmake-build-system)
- (arguments `(#:configure-flags '("../clFFT-2.10.1/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f))
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("cmake" ,cmake)
- ("libtool" ,libtool)
- ("pkg-config" ,pkg-config)))
- (inputs `(("curl" ,curl)
- ("dbus" ,dbus)
- ("enca" ,enca)
- ("eudev" ,eudev)
+ (arguments
+ `(#:configure-flags '("../source/src"
+ "-DBUILD_TEST=ON"
+ "-DUSE_SYSTEM_GTEST=ON"
+ "-DBoost_USE_STATIC_LIBS=OFF")
+ #:test-target "Test"))
+ (native-inputs
+ `(("boost" ,boost)
("fftw-openmpi" ,fftw-openmpi)
- ("glew" ,glew)
- ("libcap" ,libcap)
- ("libjpeg" ,libjpeg)
- ("libltdl" ,libltdl)
- ("libtiff" ,libtiff)
- ("mesa-utils" ,mesa-utils)
- ("openmpi" ,openmpi)
- ("ocl-icd" ,ocl-icd)
- ("opencl-headers" ,opencl-headers)
- ("randrproto" ,randrproto)
- ("libxrandr" ,libxrandr)
- ("xineramaproto" ,xineramaproto)
- ("libxinerama" ,libxinerama)
- ("libxcursor" ,libxcursor)
- ("python" ,python-2)))
- (home-page "http://www.glfw.org/")
- (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (license (list license:gpl2))))
+ ("fftwf" ,fftwf)
+ ("googletest" ,googletest)))
+ (inputs
+ `(("ocl-icd" ,ocl-icd)
+ ("opencl-headers" ,opencl-headers)))
+ (home-page "https://github.com/clMathLibraries/clFFT/")
+ (synopsis "Library containing FFT functions written in OpenCL")
+ (description "@code{clFFT} is a software library containing FFT functions
+written in @code{OpenCL}. In addition to GPU devices, the library also supports
+running on CPU devices to facilitate debugging and heterogeneous programming.")
+ (license license:asl2.0)))
-(define-public compute
+(define-public compute ; superceeded by boost-1.61+
(package
(name "compute")
- (version "v0.5")
+ (version "0.5")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/boostorg/compute/archive/"
- version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/boostorg/compute.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32
- "1r16zd1wdnn9gx278mkvr13k3i79hr35v6vj0fn7v3n92ngwxnhd"))))
+ "0jc04k43br49hqgzrxfn3wfz2m94q1z45zfg5nahqb7p0lbfgwyx"))))
(build-system cmake-build-system)
- (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f))
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("cmake" ,cmake)
- ("libtool" ,libtool)
- ("pkg-config" ,pkg-config)))
- (inputs `(("curl" ,curl)
- ("dbus" ,dbus)
- ("enca" ,enca)
- ("eudev" ,eudev)
- ("fftw-openmpi" ,fftw-openmpi)
- ("glew" ,glew)
- ("boost" ,boost)
- ("libcap" ,libcap)
- ("libjpeg" ,libjpeg)
- ("libltdl" ,libltdl)
- ("libtiff" ,libtiff)
- ("mesa-utils" ,mesa-utils)
- ("openmpi" ,openmpi)
+ (arguments
+ `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON"
+ "-DCMAKE_BUILD_TYPE=Release")
+ #:tests? #f)) ; tests require OpenCL device
+ (native-inputs
+ `(("boost" ,boost-for-mysql) ; 1.59.0
("opencl-headers" ,opencl-headers)
- ("ocl-icd" ,ocl-icd)
- ("randrproto" ,randrproto)
- ("libxrandr" ,libxrandr)
- ("xineramaproto" ,xineramaproto)
- ("libxinerama" ,libxinerama)
- ("libxcursor" ,libxcursor)
- ("python" ,python-2)))
- (home-page "http://boost.org")
- (synopsis "Peer-reviewed portable C++ source libraries,BoostCompute")
- (description "Peer-reviewed portable C++ source libraries,BoostCompute")
- (license (list license:x11-style))))
+ ("ocl-icd" ,ocl-icd)))
+ (home-page "http://boostorg.github.io/compute/")
+ (synopsis "C++ GPU Computing Library for OpenCL")
+ (description
+ "@code{Boost.Compute} is a GPU/parallel-computing library for C++ based on
+@code{OpenCL}. The core library is a thin C++ wrapper over the @code{OpenCL
+API} and provides access to compute devices, contexts, command queues and memory
+buffers.")
+ (license license:boost1.0)))