diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 11 |
1 files changed, 6 insertions, 5 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 0c88442..5b77fb1 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -939,12 +939,13 @@ manipulations on VCF files.") (name "pindel") (version "0.2.5b8") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/genome/pindel/archive/v" - version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/genome/pindel.git") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "06bsf0psxwf7h5p3j97xkh9k5qrwhxh6xn942y1j1m2inyhgs8bz")))) + (base32 "16a32fbgv1n58nfcxa1nyphrdrad80sgpinfa9p028n6plwycpww")))) (build-system gnu-build-system) (inputs `(("samtools" ,samtools) |