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-rw-r--r--gn/packages/afnumpy.scm84
-rw-r--r--gn/packages/arrayfire.scm216
-rw-r--r--gn/packages/beignet.scm158
-rw-r--r--gn/packages/clBLAS.scm186
-rw-r--r--gn/packages/clFFT.scm158
-rw-r--r--gn/packages/genenetwork.scm8
-rw-r--r--gn/packages/glfw.scm83
-rw-r--r--gn/packages/hyphy.scm84
-rw-r--r--gn/packages/llvm.scm65
-rw-r--r--gn/packages/ocl-icd.scm99
-rw-r--r--gn/packages/opencl-headers.scm63
-rw-r--r--gn/packages/opencl-icd-loader.scm95
-rw-r--r--gn/packages/openfyba.scm (renamed from gn/packages/OpenFYBA)42
-rw-r--r--gn/packages/pocl.scm328
14 files changed, 1556 insertions, 113 deletions
diff --git a/gn/packages/afnumpy.scm b/gn/packages/afnumpy.scm
new file mode 100644
index 0000000..55c05ad
--- /dev/null
+++ b/gn/packages/afnumpy.scm
@@ -0,0 +1,84 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages afnumpy)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (gnu packages)
+ #:use-module (gnu packages attr)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages compression)
+ #:use-module (gnu packages databases)
+ #:use-module (gnu packages fontutils)
+ #:use-module (gnu packages ghostscript)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages gtk)
+ #:use-module (gnu packages icu4c)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages libffi)
+ #:use-module (gnu packages linux)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages multiprecision)
+ #:use-module (gnu packages networking)
+ #:use-module (gnu packages ncurses)
+ #:use-module (gnu packages pcre)
+ #:use-module (gnu packages perl)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages readline)
+ #:use-module (gnu packages statistics)
+ #:use-module (gnu packages texlive)
+ #:use-module (gnu packages texinfo)
+ #:use-module (gnu packages tls)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages xml)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages zip)
+ #:use-module (guix packages)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix utils)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system python)
+ #:use-module (guix build-system trivial))
+
+(define-public afnumpy
+(let ((commit "c5594c1"))
+(package
+ (name "afnumpy")
+ (version (string-append "rel1-" commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/FilipeMaia/afnumpy.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0n30xn8cz0ww7czb3m6dz5sh87khan7ag3vb192narmxj37l8qy7"))))
+ (build-system python-build-system)
+ ;; (native-inputs
+ ;; `(("python-setuptools" ,python-setuptools)))
+ (arguments
+ `(#:python ,python-2
+ #:tests? #f))
+ (home-page "https://github.com/FilipeMaia/afnumpy")
+ (synopsis "Numerical library array processing of numbers, strings, records and objects")
+ (description
+ "A GPGPU-accelerated drop-in of python's numpy")
+ (license license:gpl2))))
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm
index 5869a88..21c1895 100644
--- a/gn/packages/arrayfire.scm
+++ b/gn/packages/arrayfire.scm
@@ -18,12 +18,16 @@
(define-module (gn packages arrayfire)
#:use-module (guix packages)
+ #:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download)
+ #:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
- #:use-module (guix licenses)
+ #:use-module (gnu packages)
+ #:use-module (guix utils)
#:use-module (gnu packages algebra)
#:use-module (gnu packages autotools)
+ #:use-module (gnu packages bootstrap)
#:use-module (gnu packages curl)
#:use-module (gnu packages gawk)
#:use-module (gnu packages cmake)
@@ -31,155 +35,189 @@
#:use-module (gnu packages glib)
#:use-module (gnu packages image)
#:use-module (gnu packages video)
- #:use-module (gnu packages tls)
#:use-module (gnu packages textutils)
;; #:use-module (gnu packages fftw)
;; #:use-module (gnu packages fftw-openmpi) - in algebra
;; #:use-module (gnu packages fftwf)
#:use-module (gnu packages gl)
- #:use-module (gnu packages glew)
+ #:use-module (gnu packages gnupg)
#:use-module (gnu packages pkg-config)
- #:use-module (gnu packages mesa)
+ #:use-module (gnu packages maths)
#:use-module (gnu packages web)
+ #:use-module (gnu packages wget)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages zip)
#:use-module (gnu packages linux))
(define-public arrayfire
- (package
+(package
(name "arrayfire")
- (version "v3.3.alpha")
+ (version "3.3.1")
(source (origin
(method url-fetch)
- (uri (string-append "https://github.com/arrayfire/arrayfire/archive/" version
- ".tar.gz"))
+ (uri (string-append "http://arrayfire.com/arrayfire_source/arrayfire-full-" version
+ ".tar.bz2"))
+ (file-name (string-append name "-" version ".tar.bz2"))
(sha256
(base32
- "0rla0mi5wby8bkpzrj063y6js3d4dlfl3qwfvm8m8skfc21dz52p"))))
- (build-system cmake-build-system)
- (arguments `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release -DBUILD_OPENCL=ON")))
- (native-inputs
- `(("autoconf" ,autoconf)
+ "045adww6dqmyz6kkfmq7xawi5v9a894yp5j9pzn6j568gi48pyqc"))))
+ (native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)
- ("cmake" ,cmake)
- ("doxygen" ,doxygen)
("gawk" ,gawk)
- ("gettext" ,gnu-gettext)
- ("icedtea7" ,icedtea7)
+ ("git" ,git)
+ ("glew" ,glew)
("libtool" ,libtool)
- ("pkg-config" ,pkg-config)
- ("swig" ,swig)
- ("which" ,which)
- ("yasm" ,yasm)))
- (inputs
- `(("boost" ,boost)
- ("bzip2" ,bzip2)
+ ("pkg-config" ,pkg-config)))
+ (inputs `(("boost" ,boost)
("glfw" ,glfw)
("curl" ,curl)
+ ("atlas" ,atlas)
("dbus" ,dbus)
+ ("opencl-headers" ,opencl-headers)
+ ("ocl-icd" ,ocl-icd)
("enca" ,enca)
("eudev" ,eudev)
- ("fontconfig" ,fontconfig)
- ("freetype" ,freetype)
- ("fribidi" ,fribidi)
("glew" ,glew)
- ("gnutls" ,gnutls)
- ("gperf" ,gperf)
+ ("glib" ,glib)
+ ("lapack" ,lapack)
+ ("scalapack" ,scalapack)
("libcap" ,libcap)
- ("libgcrypt" ,libgcrypt)
("libjpeg" ,libjpeg)
("libltdl" ,libltdl)
- ("libssh" ,libssh)
("libtiff" ,libtiff)
- ("libxml2" ,libxml2)
- ("libxmu" ,libxmu)
- ("libxrandr" ,libxrandr)
- ("libxrender" ,libxrender)
- ("libxslt" ,libxslt)
- ("libxt" ,libxt)
("libyajl" ,libyajl)
- ("lzo" ,lzo)
("mesa-utils" ,mesa-utils)
- ("mysql" ,mysql)
- ("openssl" ,openssl)
- ("pcre" ,pcre)
("python" ,python-2)
- ("tinyxml" ,tinyxml)
- ("unzip" ,unzip)
- ("zip" ,zip)
("freeimage" ,freeimage)
+ ("freeglut" ,freeglut)
("fftw" ,fftw)
("fftwf" ,fftwf)
("fftw-openmpi" ,fftw-openmpi)
- ("atlas" ,atlas)
- ("gfortran", gfortran)
("glew" ,glew)
("glu" ,glu)
- ("libx11" ,libx11)
- ("libxi" ,libxi)
- ("libxrandr" ,libxrandr)
- ("libxxf86vm" ,libxxf86vm)
- ("inputproto" ,inputproto)
- ("glproto" ,glproto)
- ("zlib" ,zlib)))
+ ("openblas" ,openblas)
+ ("wget" ,wget)
+ ("cmake" ,cmake)))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:configure-flags '("-DBUILD_OPENCL=OFF" "-DBUILD_CUDA=OFF" "-DBUILD_GRAPHICS=OFF")
+ #:tests? #f))
(synopsis "ArrayFire: a general purpose GPU library. https://arrayfire.com")
(description "ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple.")
(home-page "http://arrayfire.com/")
- (license gpl3+)))
+ (license (list license:gpl2
+ license:gpl2+
+ license:gpl3
+ license:gpl3+))))
(define-public glfw
(package
(name "glfw")
- (version "3.0.4")
+ (version "3.1.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/glfw/glfw/archive/"
- version ".zip"))
- (file-name (string-append name "-" version ".zip"))
+ version ".tar.gz"))
(sha256
(base32
- "1g0jm80cakk60477zz9z1mpsznxaadsfm318yiigf6kackrkqfqg"))))
- (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")))
- (native-inputs
- `(("autoconf" ,autoconf)
+ "08pixv8hd5xsccf7l8cqcijjqaq4k4da8qbp77wggal2fq445ika"))))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
+ #:tests? #f))
+ (native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)
("cmake" ,cmake)
+ ("git" ,git)
("libtool" ,libtool)
+ ("libpthread-stubs" ,libpthread-stubs)
("pkg-config" ,pkg-config)))
- (inputs
- `(("bzip2" ,bzip2)
- ("curl" ,curl)
+ (inputs `(("curl" ,curl)
("dbus" ,dbus)
("enca" ,enca)
("eudev" ,eudev)
- ("fontconfig" ,fontconfig)
- ("freetype" ,freetype)
- ("fribidi" ,fribidi)
("glew" ,glew)
- ("gnutls" ,gnutls)
- ("gperf" ,gperf)
("libcap" ,libcap)
- ("libgcrypt" ,libgcrypt)
("libjpeg" ,libjpeg)
("libltdl" ,libltdl)
- ("libssh" ,libssh)
("libtiff" ,libtiff)
- ("libxml2" ,libxml2)
- ("libxmu" ,libxmu)
- ("libxrandr" ,libxrandr)
- ("libxrender" ,libxrender)
- ("libxslt" ,libxslt)
- ("libxt" ,libxt)
- ("lzo" ,lzo)
("mesa-utils" ,mesa-utils)
- ("mysql" ,mysql)
- ("openssl" ,openssl)
- ("python" ,python-2)
- ("tinyxml" ,tinyxml)
- ("unzip" ,unzip)
- ("zip" ,zip)
- ("zlib" ,zlib)))
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("python" ,python-2)))
(home-page "http://www.glfw.org/")
(synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events. It is easy to integrate into existing applications and does not lay claim to the main loop.
-GLFW is written in C and has native support for Windows, OS X and many Unix-like systems using the X Window System, such as Linux and FreeBSD.
-GLFW is licensed under the zlib/libpng license.")
- (license license:gpl2+)))
+ (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (license (list license:gpl2))))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license (list license:gpl2 license:ruby))))
+
+(define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license (list license:gpl2)))))
+
diff --git a/gn/packages/beignet.scm b/gn/packages/beignet.scm
new file mode 100644
index 0000000..a9e7a75
--- /dev/null
+++ b/gn/packages/beignet.scm
@@ -0,0 +1,158 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages beignet)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix packages)
+ #:use-module (gnu packages)
+ #:use-module (guix utils)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages bootstrap)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages compression)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages llvm)
+ #:use-module (gnu packages libedit)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages ncurses)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages xdisorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages zip)
+ #:use-module (gnu packages linux))
+
+(define-public beignet
+ (package
+ (name "beignet")
+ (version "1.1.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://01.org/sites/default/files/beignet-"
+ version "-source.tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "068i5srqpncfw0kklxdyzxcm5w56pi91jp7pkv6cglzvnjgcdx4v"))))
+ (inputs `(("autoconf" ,autoconf)
+ ("llvm" ,llvm-3.5)
+ ("libpthread-stubs", libpthread-stubs)
+ ("clang" ,clang-3.5)
+ ("libdrm" ,libdrm)
+ ("libtool" ,libtool)
+ ("libsm" ,libsm)
+ ("libxfixes" ,libxfixes)
+ ("libxext" ,libxext)
+ ("libedit" ,libedit)
+ ("xextproto" ,xextproto)
+ ("python" ,python-2)
+ ("opencl-headers" ,opencl-headers)
+ ("glu" ,glu)
+ ("zlib" ,zlib)
+ ("pkg-config" ,pkg-config)
+ ("freeglut" ,freeglut)
+ ("mesa-utils" ,mesa-utils)
+ ("ncurses" ,ncurses)
+ ("ocl-icd" ,ocl-icd)))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release" "-DCOMPILER=CLANG") #:tests? #f))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "Intel's OpenCL framework")
+ (description "Intel's OpenCL framework that works with Intel IvyBridge GPUs and above")
+ (license license:gpl2)))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license license:gpl2)))
+
+(define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license license:gpl2))))
+
+
diff --git a/gn/packages/clBLAS.scm b/gn/packages/clBLAS.scm
new file mode 100644
index 0000000..561ee2b
--- /dev/null
+++ b/gn/packages/clBLAS.scm
@@ -0,0 +1,186 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages clBLAS)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages bootstrap)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages gcc)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages mpi)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages zip)
+ #:use-module (gnu packages linux))
+
+(define-public clBLAS
+ (package
+ (name "clBLAS")
+ (version "v2.10")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/clMathLibraries/clBLAS/archive/"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0adlb02lqzrklfybhnv4n0p37mvkvdi3vqiwa05x2mv05ywnr93j"))))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("../clBLAS-2.10/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f))
+ (native-inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("cmake" ,cmake)
+ ("gfortran" ,gfortran)
+ ("libtool" ,libtool)
+ ("pkg-config" ,pkg-config)))
+ (inputs `(("curl" ,curl)
+ ("dbus" ,dbus)
+ ("enca" ,enca)
+ ("eudev" ,eudev)
+ ("fftw-openmpi" ,fftw-openmpi)
+ ("glew" ,glew)
+ ("googletest" ,googletest)
+ ("libcap" ,libcap)
+ ("libjpeg" ,libjpeg)
+ ("libltdl" ,libltdl)
+ ("libtiff" ,libtiff)
+ ("mesa-utils" ,mesa-utils)
+ ("openmpi" ,openmpi)
+ ("ocl-icd" ,ocl-icd)
+ ("openblas" ,openblas)
+ ("opencl-headers" ,opencl-headers)
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("python" ,python-2)))
+ (home-page "http://www.glfw.org/")
+ (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (license (list license:gpl2))))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license (list license:gpl2 license:ruby))))
+
+(define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license (list license:gpl2)))))
+
+(define-public googletest
+ (package
+ (name "googletest")
+ (version "1.7.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/google/googletest/archive/release-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1k0nf1l9cb3prdmsvaajl5i31bx86c1mw0d5jgzykz7rzm36afpp"))))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("-DCMAKE_BUILD_TYPE=RelWithDebInfo") #:tests? #f))
+ (inputs `(("automake" ,automake)
+ ("autoconf" ,autoconf)
+ ("libtool" ,libtool)
+ ("cmake" ,cmake)
+ ("python" ,python-2)
+ ("pkg-config" ,pkg-config)))
+ (home-page "https://github.com/google/googletest")
+ (synopsis "Google's C++ test framework")
+ (description "Google's C++ test framework")
+ (license (list license:gpl2))))
diff --git a/gn/packages/clFFT.scm b/gn/packages/clFFT.scm
new file mode 100644
index 0000000..3e72357
--- /dev/null
+++ b/gn/packages/clFFT.scm
@@ -0,0 +1,158 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages clFFT)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages bootstrap)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages mpi)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages zip)
+ #:use-module (gnu packages linux))
+
+(define-public clFFT
+ (package
+ (name "clFFT")
+ (version "v2.10.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/clMathLibraries/clFFT/archive/"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "19hrk1lf06kch8x9dpbdj0waycn2mldrmj2y4vzi7zn2gdfw6g73"))))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("../clFFT-2.10.1/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f))
+ (native-inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("cmake" ,cmake)
+ ("libtool" ,libtool)
+ ("pkg-config" ,pkg-config)))
+ (inputs `(("curl" ,curl)
+ ("dbus" ,dbus)
+ ("enca" ,enca)
+ ("eudev" ,eudev)
+ ("fftw-openmpi" ,fftw-openmpi)
+ ("glew" ,glew)
+ ("libcap" ,libcap)
+ ("libjpeg" ,libjpeg)
+ ("libltdl" ,libltdl)
+ ("libtiff" ,libtiff)
+ ("mesa-utils" ,mesa-utils)
+ ("openmpi" ,openmpi)
+ ("ocl-icd" ,ocl-icd)
+ ("opencl-headers" ,opencl-headers)
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("python" ,python-2)))
+ (home-page "http://www.glfw.org/")
+ (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (license (list license:gpl2))))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license (list license:gpl2 license:ruby))))
+
+(define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license (list license:gpl2)))))
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 033bf94..aec305b 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -141,20 +141,20 @@
(license license:agpl3+))))
(define-public genenetwork2
- (let ((commit "9e9475053"))
+ (let ((commit "8c9de7e5a2016f1e5b7397be1a8e84396e3a25c5"))
(package
(name "genenetwork2")
- (version (string-append "2.0-" commit ))
+ (version (string-append "2.0-" (string-take commit 7) ))
(source (origin
(method git-fetch)
(uri (git-reference
;; (url "https://github.com/genenetwork/genenetwork2.git")
(url "https://github.com/pjotrp/genenetwork2.git")
(commit commit)))
- (file-name (string-append name "-" commit))
+ (file-name (string-append name "-" (string-take commit 7)))
(sha256
(base32
- "09hvy9mf4dnmkb8qg49viffzrxk53m2kr4r955m84dxaa5pdrjhd"))))
+ "1kgigzs4rs6zgbqbnm40rcljzz9prlwv7n2n9an57jk58bjgf6v8"))))
(propagated-inputs `( ;; propagated for development purposes
("python" ,python-2) ;; probably superfluous
("r" ,r)
diff --git a/gn/packages/glfw.scm b/gn/packages/glfw.scm
new file mode 100644
index 0000000..30342f0
--- /dev/null
+++ b/gn/packages/glfw.scm
@@ -0,0 +1,83 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages glfw)
+ #:use-module ((guix licenses))
+ #:use-module (guix download)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages databases)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages linux))
+
+(define-public glfw
+ (package
+ (name "glfw")
+ (version "3.1.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/glfw/glfw/archive/"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "08pixv8hd5xsccf7l8cqcijjqaq4k4da8qbp77wggal2fq445ika"))))
+ (build-system cmake-build-system)
+ (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON") #:tests? #f))
+ (native-inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("cmake" ,cmake)
+ ("libtool" ,libtool)
+ ("pkg-config" ,pkg-config)))
+ (inputs `(("curl" ,curl)
+ ("dbus" ,dbus)
+ ("enca" ,enca)
+ ("eudev" ,eudev)
+ ("glew" ,glew)
+ ("libcap" ,libcap)
+ ("libjpeg" ,libjpeg)
+ ("libltdl" ,libltdl)
+ ("libtiff" ,libtiff)
+ ("mesa-utils" ,mesa-utils)
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("mysql" ,mysql)
+ ("python" ,python-2)))
+ (home-page "http://www.glfw.org/")
+ (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
+ (license (list gpl2))))
diff --git a/gn/packages/hyphy.scm b/gn/packages/hyphy.scm
new file mode 100644
index 0000000..fea73a4
--- /dev/null
+++ b/gn/packages/hyphy.scm
@@ -0,0 +1,84 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages hyphy)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix download)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages databases)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages linux))
+
+(define-public hyphy
+ (package
+ (name "hyphy")
+ (version "2.2.6")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/veg/hyphy/archive/" version
+ ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "00i3609nywb1xfq50p3kvfbvahql241ciq23jrf67z0yp4y5l5a9"))))
+ (inputs
+ `(("python" ,python-2)
+ ("fftw-openmpi" ,fftw-openmpi)))
+ (build-system cmake-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "make" "MPI")))))))
+ (arguments
+ `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release")
+ #:tests? #f))
+ (synopsis "hyphy: an open-source software package for the analysis
+of genetic sequences using techniques in phylogenetics, molecular
+evolution, and machine learning.")
+ (description "HyPhy is an open-source software package for the
+analysis of genetic sequences using techniques in phylogenetics,
+molecular evolution, and machine learning. It features a complete
+graphical user interface (GUI) and a rich scripting language for
+limitless customization of analyses. Additionally, HyPhy features
+support for parallel computing environments (via message passing
+interface (MPI)) and it can be compiled as a shared library and called
+from other programming environments such as Python and R. ")
+ (home-page "http://hyphy.org")
+ (license license:expat)))
+
+
+
diff --git a/gn/packages/llvm.scm b/gn/packages/llvm.scm
new file mode 100644
index 0000000..83ea5d1
--- /dev/null
+++ b/gn/packages/llvm.scm
@@ -0,0 +1,65 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
+;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages llvm)
+ #:use-module (guix packages)
+ #:use-module (guix licenses)
+ #:use-module (guix download)
+ #:use-module (guix utils)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (gnu packages)
+ #:use-module (gnu packages gcc)
+ #:use-module (gnu packages bootstrap) ;glibc-dynamic-linker
+ #:use-module (gnu packages perl)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xml))
+
+
+(define-public llvm
+(package
+ (name "llvm")
+ (version "3.7.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://llvm.org/releases/"
+ version "/llvm-" version ".src.tar.xz"))
+ (sha256
+ (base32
+ "1masakdp9g2dan1yrazg7md5am2vacbkb3nahb3dchpc1knr8xxy"))))
+ (build-system cmake-build-system)
+ (native-inputs
+ `(("python" ,python-wrapper)
+ ("perl" ,perl)))
+ (arguments
+ `(#:configure-flags '("-DCMAKE_SKIP_BUILD_RPATH=FALSE"
+ "-DCMAKE_BUILD_WITH_INSTALL_RPATH=FALSE")))
+ (home-page "http://www.llvm.org")
+ (synopsis "Optimizing compiler infrastructure")
+ (description
+ "LLVM is a compiler infrastructure designed for compile-time, link-time,
+runtime, and idle-time optimization of programs from arbitrary programming
+languages. It currently supports compilation of C and C++ programs, using
+front-ends derived from GCC 4.0.1. A new front-end for the C family of
+languages is in development. The compiler infrastructure includes mirror sets
+of programming tools as well as libraries with equivalent functionality.")
+ (license license:ncsa)))
diff --git a/gn/packages/ocl-icd.scm b/gn/packages/ocl-icd.scm
new file mode 100644
index 0000000..b33fe9d
--- /dev/null
+++ b/gn/packages/ocl-icd.scm
@@ -0,0 +1,99 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages ocl-icd)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (gnu packages)
+ #:use-module (gnu packages autotools)
+ #:use-module (guix packages)
+ #:use-module (guix download)
+ #:use-module (guix build-system gnu)
+ #:use-module (gnu packages linux)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages zip)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages bootstrap)
+ #:use-module (guix git-download))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license license:gpl2)))
+
+ (define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license license:gpl2))))
diff --git a/gn/packages/opencl-headers.scm b/gn/packages/opencl-headers.scm
new file mode 100644
index 0000000..bddd136
--- /dev/null
+++ b/gn/packages/opencl-headers.scm
@@ -0,0 +1,63 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages opencl-headers)
+ #:use-module ((guix licenses))
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix packages)
+ #:use-module (guix build-system gnu)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages linux))
+
+(define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license gpl2))))
diff --git a/gn/packages/opencl-icd-loader.scm b/gn/packages/opencl-icd-loader.scm
new file mode 100644
index 0000000..a8fbc7b
--- /dev/null
+++ b/gn/packages/opencl-icd-loader.scm
@@ -0,0 +1,95 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages opencl-icd-loader)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix git-download)
+ #:use-module (guix download)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages llvm)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages mpi)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages perl)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages linux))
+
+(define-public opencl-icd-loader
+(let ((commit "bf894eb"))
+ (package
+ (name "opencl-icd-loader")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-ICD-Loader.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "1sbxdd9vgl3m8j39kwvvk5cflyj7480pq0s307zg1ssidvj98v3g"))))
+(native-inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("libtool" ,libtool)
+ ("cmake" ,cmake)
+ ("pkg-config" ,pkg-config)))
+(inputs `(("python" ,python-2)
+ ("boost" ,boost)
+ ("dbus" ,dbus)
+ ("clang" ,clang)
+ ("clang-runtime" ,clang-runtime)
+ ("enca" ,enca)
+ ("eudev" ,eudev)
+ ("fftw-openmpi" ,fftw-openmpi)
+ ("glew" ,glew)
+ ("hwloc" ,hwloc)
+ ("libcap" ,libcap)
+ ("libjpeg" ,libjpeg)
+ ("libltdl" ,libltdl)
+ ("libtiff" ,libtiff)
+ ("llvm" ,llvm)
+ ("mesa-utils" ,mesa-utils)
+ ("openmpi" ,openmpi)
+ ("perl" ,perl)
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("fftw-openmpi" ,fftw-openmpi)))
+ (build-system cmake-build-system)
+ (synopsis "The Khronos OpenCL ICDs (Installable Client Driver)")
+ (description "This package provides the Khronos OpenCL ICDs")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license license:gpl2))))
diff --git a/gn/packages/OpenFYBA b/gn/packages/openfyba.scm
index 5d64381..2b20d09 100644
--- a/gn/packages/OpenFYBA
+++ b/gn/packages/openfyba.scm
@@ -16,44 +16,46 @@
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-(define-module (gnu packages OpenFYBA)
- #:use-module ((guix licenses) #:prefix license:)
+(define-module (gn packages openfyba)
+ #:use-module ((guix licenses))
#:use-module (gnu packages)
+ #:use-module (gnu packages autotools)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (gnu packages linux)
#:use-module (gnu packages textutils)
#:use-module (gnu packages base)
- #:use-module (gnu packages tls)
+ ;;#:use-module (gnu packages tls)
#:use-module (gnu packages zip)
+ #:use-module (gnu packages gnupg)
#:use-module (gnu packages bootstrap)
#:use-module (guix git-download))
-(define-public OpenFYBA
+(define-public openfyba
(package
- (name "OpenFYBA")
- (version "4.4.1")
+ (name "openfyba")
+ (version "4.1.1")
(source (origin
(method url-fetch)
- (uri (string-append "https://github.com/kartverket/fyba/archive"
+ (uri (string-append "https://github.com/kartverket/fyba/archive/"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"0ya1agi78d386skq353dk400fl11q6whfqmv31qrkn4g5vamixlr"))))
- (inputs `(("openssl" ,openssl)
- (build-system gnu-build-system)
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("libtool" ,libtool)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
(home-page "http://labs.kartverket.no/sos/")
(synopsis "source code release of the FYBA library")
- (description
- "OpenFYBA is the source code release of the FYBA library, distributed by the
-National Mapping Authority of Norway (Statens kartverk) to read and write
-files in the National geodata standard format SOSI.
-The original library has a long history, and was originally developed for
-systems as diverse as DOS, OS/2-16, OS/2-32, Win16, Win32, and various UNIX
-variants (POSIX, HPUX, Silicon graphics). In Norwegian. It shows in the
-source code. OpenFYBA has been tested to run at least on Windows and Linux
-environments. ")
- (license license:gpl2+)))
-
+ (description "OpenFYBA is the source code release of the FYBA library.")
+ (license (list gpl2))))
diff --git a/gn/packages/pocl.scm b/gn/packages/pocl.scm
new file mode 100644
index 0000000..39f16c0
--- /dev/null
+++ b/gn/packages/pocl.scm
@@ -0,0 +1,328 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gn packages pocl)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix git-download)
+ #:use-module (guix download)
+ #:use-module (guix utils)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system cmake)
+ #:use-module (guix packages)
+ #:use-module (gnu packages)
+ #:use-module (srfi srfi-1)
+ #:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages bootstrap)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages gawk)
+ #:use-module (gnu packages cmake)
+ #:use-module (gnu packages gcc)
+ #:use-module (gnu packages glib)
+ #:use-module (gnu packages image)
+ #:use-module (gnu packages video)
+ #:use-module (gnu packages textutils)
+ #:use-module (gnu packages gl)
+ #:use-module (gnu packages llvm)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages maths)
+ #:use-module (gnu packages mpi)
+ #:use-module (gnu packages web)
+ #:use-module (gnu packages perl)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages xorg)
+ #:use-module (gnu packages xml)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages zip)
+ #:use-module (gnu packages linux))
+
+(define-public pocl
+(let ((commit "7aefc52"))
+ (package
+ (name "pocl")
+ (version (string-append "v09rc-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/pocl/pocl.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "03wbcxkx1w5kx0crangsnah0xq218bhb99vglmn00wcjhhw80qim"))))
+(native-inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("libtool" ,libtool)
+ ("cmake" ,cmake)
+ ("pkg-config" ,pkg-config)))
+(inputs `(("python" ,python-2)
+ ("boost" ,boost)
+ ("dbus" ,dbus)
+ ("clang" ,clang-3.7.1)
+ ("clang-runtime" ,clang-runtime-3.7.1)
+ ("enca" ,enca)
+ ("eudev" ,eudev)
+ ("fftw-openmpi" ,fftw-openmpi)
+ ("glew" ,glew)
+ ("hwloc" ,hwloc)
+ ("libcap" ,libcap)
+ ("libjpeg" ,libjpeg)
+ ("libltdl" ,libltdl)
+ ("libtiff" ,libtiff)
+ ("llvm" ,llvm-3.7.1)
+ ("ocl-icd" ,ocl-icd)
+ ("opencl-headers" ,opencl-headers)
+ ("mesa-utils" ,mesa-utils)
+ ("openmpi" ,openmpi)
+ ("perl" ,perl)
+ ("randrproto" ,randrproto)
+ ("libxrandr" ,libxrandr)
+ ("xineramaproto" ,xineramaproto)
+ ("libxinerama" ,libxinerama)
+ ("libxcursor" ,libxcursor)
+ ("fftw-openmpi" ,fftw-openmpi)))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:configure-flags '("--enable-icd")
+ #:tests? #f
+ #:phases
+ (modify-phases %standard-phases
+ (add-before
+ 'configure 'rewrite-usr-bin
+ (lambda _
+ (zero? (system* "./autogen.sh")))))))
+ (synopsis "pocl: Portable Computing Language (pocl) aims to become a MIT-licensed
+ open source implementation of the OpenCL standard which can be easily adapted for
+ new targets and devices, both for homogeneous CPU and heterogenous GPUs/accelerators.")
+ (description "Portable Computing Language (pocl) aims to become a MIT-licensed
+ open source implementation of the OpenCL standard which can be easily adapted for
+ new targets and devices, both for homogeneous CPU and heterogenous GPUs/accelerators.")
+ (home-page "http://portablecl.org/")
+ (license license:gpl2))))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license license:gpl2)))
+
+ (define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license license:gpl2))))
+
+(define (clang-runtime-from-llvm llvm hash)
+ (package
+ (name "clang-runtime")
+ (version (package-version llvm-3.7.1))
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://llvm.org/releases/"
+ version "/compiler-rt-" version ".src.tar.xz"))
+ (sha256
+ (base32
+ "10c1mz2q4bdq9bqfgr3dirc6hz1h3sq8573srd5q5lr7m7j6jiwx"))))
+ (build-system cmake-build-system)
+ (native-inputs (package-native-inputs llvm))
+ (inputs
+ `(("llvm" ,llvm)))
+ (arguments
+ `(;; Don't use '-g' during the build to save space.
+ #:build-type "Release"))
+
+ (home-page "http://compiler-rt.llvm.org")
+ (synopsis "Runtime library for Clang/LLVM")
+ (description
+ "The \"clang-runtime\" library provides the implementations of run-time
+functions for C and C++ programs. It also provides header files that allow C
+and C++ source code to interface with the \"sanitization\" passes of the clang
+compiler. In LLVM this library is called \"compiler-rt\".")
+ (license license:ncsa)
+
+ ;; <http://compiler-rt.llvm.org/> doesn't list MIPS as supported.
+ (supported-systems (delete "mips64el-linux" %supported-systems))))
+
+(define (clang-from-llvm llvm clang-runtime hash)
+ (package
+ (name "clang")
+ (version (package-version llvm-3.7.1))
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://llvm.org/releases/"
+ version "/cfe-" version ".src.tar.xz"))
+ (sha256
+ (base32
+ "0x065d0w9b51xvdjxwfzjxng0gzpbx45fgiaxpap45ragi61dqjn"))
+ (patches (list (search-patch "clang-libc-search-path.patch")))))
+ ;; Using cmake allows us to treat llvm as an external library. There
+ ;; doesn't seem to be any way to do this with clang's autotools-based
+ ;; build system.
+ (build-system cmake-build-system)
+ (native-inputs (package-native-inputs llvm))
+ (inputs
+ `(("libxml2" ,libxml2)
+ ("libstdc++-4.9", libstdc++-4.9)
+ ("python" ,python-2)
+ ("gcc-lib" ,gcc "lib")
+ ,@(package-inputs llvm)))
+ (propagated-inputs
+ `(("llvm" ,llvm)
+ ("clang-runtime" ,clang-runtime)))
+ (arguments
+ `(#:configure-flags
+ (list "-DCLANG_INCLUDE_TESTS=True"
+
+ ;; Find libgcc_s, crtbegin.o, and crtend.o.
+ (string-append "-DGCC_INSTALL_PREFIX="
+ (assoc-ref %build-inputs "gcc-lib"))
+
+ ;; Use a sane default include directory.
+ (string-append "-DC_INCLUDE_DIRS="
+ (assoc-ref %build-inputs "libc")
+ "/include"))
+
+ ;; Don't use '-g' during the build to save space.
+ #:build-type "Release"
+
+ #:phases (modify-phases %standard-phases
+ (add-after
+ 'unpack 'set-glibc-file-names
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((libc (assoc-ref inputs "libc"))
+ (compiler-rt (assoc-ref inputs "clang-runtime")))
+ (substitute* "lib/Driver/Tools.cpp"
+ ;; Patch the 'getLinuxDynamicLinker' function to that
+ ;; it uses the right dynamic linker file name.
+ (("/lib64/ld-linux-x86-64.so.2")
+ (string-append libc
+ ,(glibc-dynamic-linker)))
+
+ ;; Link to libclang_rt files from clang-runtime.
+ (("TC\\.getDriver\\(\\)\\.ResourceDir")
+ (string-append "\"" compiler-rt "\"")))
+
+ ;; Same for libc's libdir, to allow crt1.o & co. to be
+ ;; found.
+ (substitute* "lib/Driver/ToolChains.cpp"
+ (("@GLIBC_LIBDIR@")
+ (string-append libc "/lib")))))))))
+
+ ;; Clang supports the same environment variables as GCC.
+ (native-search-paths
+ (list (search-path-specification
+ (variable "CPATH")
+ (files '("include")))
+ (search-path-specification
+ (variable "LIBRARY_PATH")
+ (files '("lib" "lib64")))))
+
+ (home-page "http://clang.llvm.org")
+ (synopsis "C language family frontend for LLVM")
+ (description
+ "Clang is a compiler front end for the C, C++, Objective-C and
+Objective-C++ programming languages. It uses LLVM as its back end. The Clang
+project includes the Clang front end, the Clang static analyzer, and several
+code analysis tools.")
+ (license license:ncsa)))
+
+(define-public llvm-3.7.1
+ (package (inherit llvm)
+ (version "3.7.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://llvm.org/releases/"
+ version "/llvm-" version ".src.tar.xz"))
+ (sha256
+ (base32
+ "1masakdp9g2dan1yrazg7md5am2vacbkb3nahb3dchpc1knr8xxy"))))))
+
+(define-public clang-runtime-3.7.1
+ (clang-runtime-from-llvm
+ llvm-3.7.1
+ "0dl1kbrhz96djsxqr61iw5h788s7ncfpfb7aayixky1bhdaydcx4"))
+
+(define-public clang-3.7.1
+ (clang-from-llvm llvm clang-runtime
+ "12yv3jwdjcbkrx7zjm8wh4jrvb59v8fdw4mnmz3zc1jb00p9k07w"))
+
+
+
+
+
generated by cgit v1.2.3 (git 2.44.0) at 2024-12-01 20:05:44 +0000