diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 16 |
1 files changed, 13 insertions, 3 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 536098c..f81c7aa 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -1659,9 +1659,18 @@ available to other researchers.") "deps/libvgio/include/handlegraph"))))) (build-system gnu-build-system) (arguments - '(#:phases + `(#:phases (modify-phases %standard-phases (delete 'configure) ; no configure script + ,@(if (target-riscv64?) + ;; riscv64 doesn't take '-march=native. This needs to be removed + ;; for all architectures if/when vg is upstreamed. + `((add-after 'unpack 'dont-build-native + (lambda _ + (substitute* (append (find-files "." "CMakeLists\\.txt") + (find-files "." "Makefile")) + (("-march=native") ""))))) + '()) (add-after 'unpack 'patch-source (lambda* (#:key inputs #:allow-other-keys) (substitute* "Makefile" @@ -1769,8 +1778,9 @@ available to other researchers.") (substitute* "Makefile" ((".*test-docs.*") ""))))) (add-after 'build 'build-manpages - (lambda _ - (invoke "make" "man"))) + (lambda* (#:key inputs #:allow-other-keys) + (when (assoc-ref inputs "asciidoctor") + (invoke "make" "man")))) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) |