diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/julia.scm | 78 |
1 files changed, 45 insertions, 33 deletions
diff --git a/gn/packages/julia.scm b/gn/packages/julia.scm index 1f39398..5aeb11f 100644 --- a/gn/packages/julia.scm +++ b/gn/packages/julia.scm @@ -4,9 +4,9 @@ #:use-module (guix packages) #:use-module (guix download) #:use-module (guix git-download) - #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) #:use-module (guix build-system julia) + #:use-module (guix build-system trivial) #:use-module (gnu packages) #:use-module (gn packages cran) #:use-module (gnu packages bioinformatics) @@ -516,7 +516,7 @@ and numerical functions for statistical computing.") (license license:expat))) ;; ready to upstream -(define-public rmath-julia +(define-public rmath-for-julia-rmath-jll ;; More recent commits fix various build issues (let ((commit "5c5dfd6baca358103fbb47cc03dc0ecee04fb1ff") (revision "1")) @@ -589,9 +589,9 @@ functions.") (propagated-inputs `(("julia-rmath-jll" ,julia-rmath-jll))) (inputs - `(("rmath" ,rmath-julia))) + `(("rmath" ,rmath-for-julia-rmath-jll))) (native-inputs - `(("rmath" ,rmath-julia))) + `(("rmath" ,rmath-for-julia-rmath-jll))) (home-page "https://github.com/JuliaStats/Rmath.jl") (synopsis "Emulate R's d-p-q-r functions for probability distributions") (description "This package provides an archive of functions that emulate @@ -630,7 +630,7 @@ R's d-p-q-r functions for probability distributions. It is a wrapper around ;; There's a Julia file for each platform, override them all (find-files "src/wrappers/" "\\.jl$"))))))) (inputs - `(("rmath" ,rmath-julia))) + `(("rmath" ,rmath-for-julia-rmath-jll))) (propagated-inputs `(("julia-jllwrappers" ,julia-jllwrappers))) (home-page "https://github.com/JuliaBinaryWrappers/Rmath_jll.jl") @@ -923,7 +923,7 @@ that still support Julia versions older than 1.6.") (find-files "src/wrappers/" "\\.jl$")) #t))))) (inputs ;required by artifacts - `(("earcut" ,earcut))) + `(("earcut" ,earcut-for-julia-earcut-jll))) (propagated-inputs `(("julia-jllwrappers" ,julia-jllwrappers))) (home-page "https://github.com/JuliaBinaryWrappers/EarCut_jll.jl") @@ -931,9 +931,9 @@ that still support Julia versions older than 1.6.") (description "") (license license:expat)))) -(define-public earcut +(define-public earcut-for-julia-earcut-jll (package - (name "earcut") + (name "earcut-for-julia-earcut-jll") (version "2.2.3") (source (origin @@ -950,37 +950,49 @@ that still support Julia versions older than 1.6.") (substitute* "CMakeLists.txt" ((".*add_subdirectory.*") "")) #t)))) - (build-system cmake-build-system) + (build-system trivial-build-system) (arguments - `(#:configure-flags '("-DEARCUT_BUILD_BENCH=OFF" - "-DEARCUT_BUILD_VIZ=OFF") - #:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "./tests")) - #t)) - ;; no install target, but no shared library either - ;(replace 'install - ; (lambda* (#:key outputs #:allow-other-keys) - ; (let ((out (assoc-ref outputs "out"))) - ) - )) - (propagated-inputs - `( - )) + `(#:modules ((guix build utils)) + #:builder + (let ((out (assoc-ref %outputs "out")) + (source (assoc-ref %build-inputs "source")) + (cwrapper.cpp (assoc-ref %build-inputs "cwrapper.cpp"))) + (begin + (use-modules (guix build utils)) + (setenv "PATH" + (string-append + (assoc-ref %build-inputs "gcc-toolchain") "/bin:" + (assoc-ref %build-inputs "xz") "/bin")) + (invoke + (string-append (assoc-ref %build-inputs "tar") "/bin/tar") "xvf" source) + (copy-file + (string-append ,name "-" ,version "-checkout/include/mapbox/earcut.hpp") + "earcut.h") + (copy-file cwrapper.cpp "cwrapper.cpp") + (invoke ,(cxx-for-target) + "-std=c++11" + "-fPIC" + "-shared" + "-o" "libearcut.so" + "cwrapper.cpp") + (install-file "libearcut.so" + (string-append out "/lib")))))) (inputs - `( - ;("glfw" ,(@ (gnu packages gl) glfw)) ; for VIZ - )) + `(("gcc-toolchain" ,(S "gcc-toolchain")) + ("cwrapper.cpp" + ,(origin + (method url-fetch) + (uri "https://raw.githubusercontent.com/JuliaPackaging/Yggdrasil/7e9ec714d786c4c841a80bdf75b84570c5bda7a1/E/EarCut/bundled/cwrapper.cpp") + (file-name (string-append "cwrapper-for-earcut-for-julia-earcut-jll-" version ".cpp")) + (sha256 + (base32 "0yf0r20306qsk1yrls5cz34vpfiazfdqc44f3mqmi76yq1ii0n09")))))) (native-inputs - `( - ;("boost" ,(@ (gnu packages boost) boost)) ; for bench - )) + `(("tar" ,(S "tar")) + ("xz" ,(S "xz")))) (home-page "https://github.com/mapbox/earcut.hpp") (synopsis "Header version of EarCut.js") (description "") + (properties '((hidden? . #t))) (license license:expat))) (define-public julia-binaryprovider |