diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/cwl.scm | 38 |
1 files changed, 29 insertions, 9 deletions
diff --git a/gn/packages/cwl.scm b/gn/packages/cwl.scm index 938cbe3..2ee83d7 100644 --- a/gn/packages/cwl.scm +++ b/gn/packages/cwl.scm @@ -53,10 +53,7 @@ "@pytest.mark.skip(reason=\"Disabled by Guix\")\ndef test_v1_0_arg_empty_prefix_separate_false")) #t))))) (propagated-inputs - `(;; does this need to be proagated? - ("node" ,node) - - ("python-bagit" ,python-bagit) + `(("python-bagit" ,python-bagit) ("python-coloredlogs" ,python-coloredlogs) ("python-mypy-extensions" ,python-mypy-extensions) ("python-prov" ,python-prov) @@ -67,15 +64,17 @@ ("python-schema-salad" ,python-schema-salad-7) ("python-setuptools" ,python-setuptools) ("python-shellescape" ,python-shellescape) - ("python-typing-extensions" ,python-typing-extensions))) - (native-inputs - `(("python-arcp" ,python-arcp) + ("python-typing-extensions" ,python-typing-extensions) + ;; Not listed as needed but seems to be necessary: + ("node" ,node) ("python-cachecontrol" ,python-cachecontrol-0.11) ("python-dateutil" ,python-dateutil) - ("python-humanfriendly" ,python-humanfriendly) ("python-lxml" ,python-lxml) + ("python-networkx" ,python-networkx))) + (native-inputs + `(("python-arcp" ,python-arcp) + ("python-humanfriendly" ,python-humanfriendly) ("python-mock" ,python-mock) - ("python-networkx" ,python-networkx) ("python-pytest" ,python-pytest) ("python-pytest-cov" ,python-pytest-cov) ("python-pytest-mock" ,python-pytest-mock) @@ -87,3 +86,24 @@ (description "Common workflow language reference implementation.") (license license:asl2.0))) + +(define-public cwl-runner + (package + (name "cwl-runner") + (version "1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cwl_runner" version)) + (sha256 + (base32 + "0011am2xqwchysdznayrmwhg4bfjl4wlq6m4k20z1m7gccyzjgw0")))) + (build-system python-build-system) + (propagated-inputs + `(("cwltool" ,cwltool))) + (home-page + "https://github.com/common-workflow-language/common-workflow-language") + (synopsis "Common workflow language reference implementation") + (description + "Common workflow language reference implementation.") + (license license:asl2.0))) |