diff options
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/genenetwork.scm | 47 |
1 files changed, 46 insertions, 1 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 3b7cc71..56f83e0 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -42,6 +42,8 @@ #:use-module (gn packages python24) #:use-module (gn packages statistics)) + + (define-public my-deploy (package (name "my-deploy") @@ -188,6 +190,49 @@ bootstrap resampling to estimate the confidence region for the location of a putative QTL.") (license license:gpl2+)))) +;; Reintroduced python2-gunicorn because we are running GN with python2 +;; right now. Please keep it until we migrate to Python3 fully! + +(define-public python-gunicorn-gn + (package + (name "python-gunicorn-gn") + (version "19.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "gunicorn" version)) + (sha256 + (base32 + "1wzlf4xmn6qjirh5w81l6i6kqjnab1n1qqkh7zsj1yb6gh4n49ps")))) + (build-system python-build-system) + (inputs + `(("python-mock" ,python-mock))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'loosen-verion-restrictions + (lambda _ + (substitute* "requirements_test.txt" + (("coverage.*") "coverage\n") + (("pytest.*") "pytest\n") + (("pytest-cov.*") "pytest-cov\n")) + #t))))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) + (home-page "https://gunicorn.org") + (synopsis "WSGI HTTP Server for UNIX") + (description "Gunicorn 'Green Unicorn' is a Python WSGI HTTP Server for +UNIX. It's a pre-fork worker model ported from Ruby's Unicorn project. The +Gunicorn server is broadly compatible with various web frameworks, simply +implemented, light on server resource usage, and fairly speedy.") + (license license:expat))) + + +(define-public python2-gunicorn-gn + (package-with-python2 python-gunicorn-gn)) + (define-public rust-qtlreaper (let ((commit "2e7fed6d45b0b602d80fa2a55835f96ef1cba9e3") @@ -271,7 +316,7 @@ location of a putative QTL.") ("rust-qtlreaper" ,rust-qtlreaper) ("nginx" ,nginx) ("python2-flask" ,python2-flask) - ("gunicorn" ,gunicorn) + ("python2-gunicorn-gn" ,python2-gunicorn-gn) ; ("python2-pillow" ,python2-pillow) - for later! ("python2-pil1" ,python2-pil1-gn) ("python2-piddle-gn" ,python2-piddle-gn) |