diff options
Diffstat (limited to 'gn/packages')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 3 | ||||
| -rw-r--r-- | gn/packages/crates-io.scm | 59 |
2 files changed, 28 insertions, 34 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 55977bf..3d6a062 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -490,9 +490,6 @@ reads.") (("\"0.7\"") "{ version = \"0.7.0-alpha.9\" }")) #t))))) - (inputs - ;; rust-handlegraph@0.7 doesn't get picked up as a rust input. - `(("rust-handlegraph-0.7" ,rust-handlegraph-0.7))) (home-page "https://github.com/marschall-lab/GFAffix") (synopsis "Identify walk-preserving shared affixes in variation graphs") (description diff --git a/gn/packages/crates-io.scm b/gn/packages/crates-io.scm index 3440985..da9e3de 100644 --- a/gn/packages/crates-io.scm +++ b/gn/packages/crates-io.scm @@ -75,37 +75,34 @@ (license license:expat))) (define-public rust-handlegraph-0.7 - ;; After this commit try the next actual release. - (let ((commit "a7ca8da640ae442ffd3ef4f5f9f358cd37c7deee") - (revision "1")) - (package - (inherit rust-handlegraph-0.3) - (name "rust-handlegraph") - (version (git-version "0.7.0-alpha.9" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/chfi/rs-handlegraph") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 "19cxgysxam79k6skanh4q4hafi4aglzcmg5hmm3vfnrzbz9q6js0")))) - (arguments - `(#:rust ,rust-1.47 ; or later - #:cargo-inputs - (("rust-anyhow" ,rust-anyhow-1) - ("rust-boomphf" ,rust-boomphf-0.5) - ("rust-bstr" ,rust-bstr-0.2) - ("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5) - ("rust-fnv" ,rust-fnv-1) - ("rust-gfa" ,rust-gfa-0.10) - ("rust-log" ,rust-log-0.4) - ("rust-rayon" ,rust-rayon-1) - ("rust-succinct" ,rust-succinct-0.5)) - #:cargo-development-inputs - (("rust-quickcheck" ,rust-quickcheck-0.9) - ("rust-rand" ,rust-rand-0.7))))))) + (package + (inherit rust-handlegraph-0.3) + (name "rust-handlegraph") + (version "0.7.0-alpha.9") + (source + (origin + (method url-fetch) + (uri (crate-uri "handlegraph" version)) + (file-name + (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1frlcdwhycjvizb0gfb0v36vxjdi0jxagl2l2v6dzdjxpaawv9rs")))) + (arguments + `(#:rust ,rust-1.47 ; or later + #:cargo-inputs + (("rust-anyhow" ,rust-anyhow-1) + ("rust-boomphf" ,rust-boomphf-0.5) + ("rust-bstr" ,rust-bstr-0.2) + ("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5) + ("rust-fnv" ,rust-fnv-1) + ("rust-gfa" ,rust-gfa-0.10) + ("rust-log" ,rust-log-0.4) + ("rust-rayon" ,rust-rayon-1) + ("rust-succinct" ,rust-succinct-0.5)) + #:cargo-development-inputs + (("rust-quickcheck" ,rust-quickcheck-0.9) + ("rust-rand" ,rust-rand-0.7)))))) (define-public rust-quick-csv-0.1 (package |