diff options
Diffstat (limited to 'gn/packages')
| -rw-r--r-- | gn/packages/book_evolutionary_genomics.scm | 56 |
1 files changed, 52 insertions, 4 deletions
diff --git a/gn/packages/book_evolutionary_genomics.scm b/gn/packages/book_evolutionary_genomics.scm index eaceab7..dca4350 100644 --- a/gn/packages/book_evolutionary_genomics.scm +++ b/gn/packages/book_evolutionary_genomics.scm @@ -25,6 +25,7 @@ ; #:use-module (gnu packages ldc) #:use-module (gnu packages python) #:use-module (gnu packages statistics) + #:use-module (gnu packages tls) #:use-module (gnu packages vim) ; #:use-module (gnu packages web) ; #:use-module (gnu packages xml) @@ -36,7 +37,7 @@ ; #:use-module (gn packages statistics) #:use-module (srfi srfi-1)) -(define-public r-gener +(define-public r-gener ;; poor implementation (package (name "r-gener") (version "2.20.0") @@ -55,6 +56,54 @@ ".") (license license:expat))) ; CeCILL-2.0 +(define-public r-soap ;; obsolete package and fails to build + (package + (name "r-soap") + (version "1.1.4") + (source + (origin + (method url-fetch) + (uri "https://sourceforge.net/projects/rsoap/files/RSOAP/1.1.4/RSOAP-1.1.4.tar.gz/download") + (sha256 + (base32 + "0vggycbjnjpx2c4q4wgaxfd0ig3prw31gdw9djjkbmzc3crbhj8j")))) + (propagated-inputs + `(("python" ,python) + ("r" ,r) + )) + (build-system r-build-system) + (home-page "https://sourceforge.net/projects/rsoap/") + (synopsis "SOAP server for R") + (description + ".") + (license license:expat))) ; CeCILL-2.0 + +(define-public r-rserve + (package + (name "r-rserve") + (version "1.8-4") + (source + (origin + (method url-fetch) + (uri "https://github.com/s-u/Rserve/releases/download/1.8-4/Rserve_1.8-4.tar.gz") + (sha256 + (base32 + "1dncwiyhy1s1pimb6f2dzs3ivahah5id3chw4r10j92754bxmrn2")))) + (propagated-inputs + `( + ; ("python" ,python) + ("r" ,r) + )) + (inputs `(("zlib" ,zlib) + ("openssl" ,openssl))) + + (build-system r-build-system) + (home-page "https://github.com/s-u/Rserve") + (synopsis "Fast, flexible and powerful server providing access to R from many languages and systems http://RForge.net/Rserve") + (description + ".") + (license license:gpl2))) + (define-public book-evolutionary-genomics (let ((md5 "93e745e9c")) (package @@ -73,10 +122,9 @@ (propagated-inputs `(("python" ,python) ("r" ,r) - )) - (inputs - `( ("r-gener" ,r-gener) + ("r-biostrings" ,r-biostrings) + ("r-rserve" ,r-rserve) )) (arguments `(#:modules ((guix build utils)) |