diff options
Diffstat (limited to 'gn/packages')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 13 |
1 files changed, 7 insertions, 6 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index b503e22..ea4bf91 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -48,7 +48,6 @@ #:use-module (gn packages statistics) #:use-module (srfi srfi-1)) - (define-public r-biocpreprocesscore (package (name "r-biocpreprocesscore") @@ -69,7 +68,6 @@ "A library of core preprocessing routines.") (license license:lgpl2.0+))) - (define-public r-wgcna (let ((commit "425bc170cc0873ddbd414675ac40f6d4d724c7cb")) (package @@ -331,11 +329,14 @@ association studies (GWAS).") ("htslib-src" ,(origin (method url-fetch) - (uri "https://github.com/samtools/htslib/archive/1.3.tar.gz") - (file-name "htslib-1.3.tar.gz") + (uri (string-append "https://github.com/lomereiter/htslib/archive/" + "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5" ".tar.gz")) + ;;(uri "https://github.com/samtools/htslib/archive/1.3.tar.gz") + (file-name "htslib-2f3c3ea7b.tar.gz") (sha256 - (base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9")) - (patches (list (search-patch "htslib-add-cram_to_bam.patch"))))) + (base32 "0bl6w856afnbgdsw8bybsxpqsyf2ba3f12rqh47hhpxvv866g08w")))) + ;;(base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9")) + ;;(patches (list (search-patch "htslib-add-cram_to_bam.patch"))))) ("biod-src" ,(origin (method git-fetch) |