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-rw-r--r--gn/packages/genenetwork.scm32
1 files changed, 32 insertions, 0 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index a621124..e6289b9 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -25,6 +25,7 @@
#:use-module (gnu packages python-science)
#:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
+ #:use-module (gnu packages rust)
#:use-module (gnu packages statistics)
#:use-module (gnu packages version-control)
#:use-module (gnu packages vim)
@@ -282,6 +283,37 @@ implemented, light on server resource usage, and fairly speedy.")
(description "Reimplementation of genenetwork/QTLReaper in Rust")
(license #f))))
+(define-public gfautil
+ (package
+ (name "gfautil")
+ (version "0.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "gfautil" version))
+ (file-name
+ (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0cgiis9v1nd4m7zxvgsz8jf8ijv4d8fa5wb7cpnjshksb8z7xh69"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:rust ,rust-1.42
+ #:cargo-inputs
+ (("rust-bstr" ,rust-bstr-0.2)
+ ("rust-clap" ,rust-clap-2)
+ ("rust-gfa" ,rust-gfa-0.6)
+ ("rust-handlegraph" ,rust-handlegraph-0.3)
+ ("rust-rayon" ,rust-rayon-1)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-structopt" ,rust-structopt-0.3))))
+ (home-page "https://github.com/chfi/rs-gfa-utils")
+ (synopsis "Command line tools for working with GFA files")
+ (description
+ "This package provides command line tools for working with @acronym{GFA,
+Graphical Fragment Assembly} files and related formats.")
+ (license license:expat)))
+
(define-public genenetwork2
(let ((commit "1538ffd33af19e6ac922b4ee85fe701408968dfd"))
(package