diff options
Diffstat (limited to 'gn/packages/genenetwork.scm')
| -rw-r--r-- | gn/packages/genenetwork.scm | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index a621124..e6289b9 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -25,6 +25,7 @@ #:use-module (gnu packages python-science) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages rust) #:use-module (gnu packages statistics) #:use-module (gnu packages version-control) #:use-module (gnu packages vim) @@ -282,6 +283,37 @@ implemented, light on server resource usage, and fairly speedy.") (description "Reimplementation of genenetwork/QTLReaper in Rust") (license #f)))) +(define-public gfautil + (package + (name "gfautil") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (crate-uri "gfautil" version)) + (file-name + (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0cgiis9v1nd4m7zxvgsz8jf8ijv4d8fa5wb7cpnjshksb8z7xh69")))) + (build-system cargo-build-system) + (arguments + `(#:rust ,rust-1.42 + #:cargo-inputs + (("rust-bstr" ,rust-bstr-0.2) + ("rust-clap" ,rust-clap-2) + ("rust-gfa" ,rust-gfa-0.6) + ("rust-handlegraph" ,rust-handlegraph-0.3) + ("rust-rayon" ,rust-rayon-1) + ("rust-serde" ,rust-serde-1) + ("rust-structopt" ,rust-structopt-0.3)))) + (home-page "https://github.com/chfi/rs-gfa-utils") + (synopsis "Command line tools for working with GFA files") + (description + "This package provides command line tools for working with @acronym{GFA, +Graphical Fragment Assembly} files and related formats.") + (license license:expat))) + (define-public genenetwork2 (let ((commit "1538ffd33af19e6ac922b4ee85fe701408968dfd")) (package |