diff options
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 535018b..9de6ad8 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -2717,7 +2717,8 @@ multiple sequence alignment.") '#$(map (lambda (label) (or (this-package-input (string-append label "-hwcaps")) (this-package-input label))) - (list "bcftools" + (list "bc" + "bcftools" "bedtools" "gfaffix" "htslib" @@ -2735,6 +2736,7 @@ multiple sequence alignment.") "samtools" "seqwish" "smoothxg" + "time" "vcfbub" "vcflib" "vg" @@ -2752,7 +2754,8 @@ multiple sequence alignment.") (("/usr/local/bin/nucmer2vcf.R") (string-append out "/bin/nucmer2vcf.R"))))))))) (inputs - (list bcftools + (list bc + bcftools bedtools gfaffix guile-3.0 ; for wrap-script @@ -2772,6 +2775,7 @@ multiple sequence alignment.") samtools seqwish smoothxg + time vcfbub vcflib vg |