diff options
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 20 |
1 files changed, 4 insertions, 16 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 4ed6b54..2d1b55f 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -3430,8 +3430,8 @@ extension for metagenomic datasets, QUAST-LG, the extension for large genomes "http://topaz.gatech.edu/GeneMark/license_download.cgi"))))) (define-public blobtools - (let ((commit "6ed1ccf06617a0997f99cc2b28ffc82766c9a763") - (revision "2")) ;; 2022-10-02 + (let ((commit "1bed7870198831539b370f9254d5d30b94199a18") + (revision "3")) ;; 2022-09-21 (package (name "blobtools") (version (git-version "1.1.1" revision commit)) @@ -3443,22 +3443,10 @@ extension for metagenomic datasets, QUAST-LG, the extension for large genomes (commit commit))) (file-name (git-file-name name version)) (sha256 - (base32 "03a8n0s8qq6il5650basz4mlfp25743ii239jd0xsiirk5mmr8h7")) - (patches (search-patches "blobtools-setup-py.patch")) - )) + (base32 "0nki2m1sxkx75rkwzw6dqvxzyswrv47q0rz4bx9w0bz4fawnx86z")))) (build-system python-build-system) (arguments - (list #:tests? #f ; No tests in repo. - #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'fix-setup.py - (lambda _ - (substitute* "setup.py" - (("^reqs = .*") - (string-append "with open ('requirements.txt') as f:\n" - " reqs = f.read().splitlines()\n")) - (("cmdclass.*") - "entry_points={'console_scripts': [\"blobtools=lib.interface:main\"]},\n"))))))) + (list #:tests? #f)) ; No tests in repo. (inputs (list python-docopt python-matplotlib |