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-rw-r--r--gn/packages/bioinformatics.scm13
1 files changed, 11 insertions, 2 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index 8d222e5..787c2a9 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -19,6 +19,7 @@
#:use-module (gnu packages bioinformatics)
#:use-module (gnu packages boost)
#:use-module (gnu packages compression)
+ #:use-module (gnu packages databases)
#:use-module (gnu packages cpio)
#:use-module (gnu packages file)
#:use-module (gnu packages java)
@@ -135,7 +136,15 @@
(sha256
(base32
"09hvy9mf4dnmkb8qg49viffzrxk53m2kr4r955m84dxaa5pdrjhd"))))
- (inputs `(("nginx" ,nginx)
+ (propagated-inputs `(
+ ("python" ,python-2) ;; probably superfluous
+ ("r" ,r)
+ ))
+ (inputs `(
+ ("mysql" ,mysql)
+ ("nginx" ,nginx)
+ ("python2-jinja2" ,python2-jinja2)
+ ("python2-sqlalchemy" ,python2-sqlalchemy)
("python2-setuptools" ,python2-setuptools)
("python2-scipy" ,python2-scipy)
("python2-numpy" ,python2-numpy)
@@ -144,7 +153,7 @@
("python2-redis" ,python2-redis)
("python2-requests" ,python2-requests)
("python2-simplejson" ,python2-simplejson)
- ("python" ,python-2) ;; probably superfluous
+ ("python2-pyyaml" ,python2-pyyaml)
("plink" ,plink)
("r-qtl" ,r-qtl)
))