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authorRoel Janssen2016-02-24 12:53:01 +0100
committerRoel Janssen2016-02-24 12:53:01 +0100
commitc594b866b37fc38d33a87395ca8b1ef7615e2702 (patch)
treef549552f2081180b68d11492a9dda30d765c801f /htslib-add-cram_to_bam.patch
parent1f1521af21ccdad98ad60d3d7e60c0ba4f5eb1dd (diff)
downloadguix-bioinformatics-c594b866b37fc38d33a87395ca8b1ef7615e2702.tar.gz
Cleaner patch file.
Diffstat (limited to 'htslib-add-cram_to_bam.patch')
-rw-r--r--htslib-add-cram_to_bam.patch4
1 files changed, 2 insertions, 2 deletions
diff --git a/htslib-add-cram_to_bam.patch b/htslib-add-cram_to_bam.patch
index 8c43497..c90f7aa 100644
--- a/htslib-add-cram_to_bam.patch
+++ b/htslib-add-cram_to_bam.patch
@@ -14,8 +14,8 @@ by Roel Janssen <roel@gnu.org>
int bam_idx, rg_len;
char name_a[1024], *name;
diff -Naur htslib-1.3/cram/cram_decode.h htslib-1.3-patched/cram/cram_decode.h
---- htslib-1.3/cram/cram_decode.h 2015-12-15 17:34:33.000000000 +0100
-+++ htslib-1.3-patched/cram/cram_decode.h 2016-02-24 11:15:04.556809864 +0100
+--- a/cram/cram_decode.h 2015-12-15 17:34:33.000000000 +0100
++++ b/cram/cram_decode.h 2016-02-24 11:15:04.556809864 +0100
@@ -104,6 +104,8 @@
int cram_decode_slice(cram_fd *fd, cram_container *c, cram_slice *s,
SAM_hdr *hdr);