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authorFrederick Muriuki Muriithi2022-08-31 05:31:01 +0300
committerFrederick Muriuki Muriithi2022-08-31 05:31:01 +0300
commite1b55f000b82e2c598735fb62f1ea933e5155c68 (patch)
tree6a9805f6aa38652c657fdd0392e2a8dc336b87d1 /gn
parent1c72592632bb0d38fd274c43618af4ff50ad19dd (diff)
downloadguix-bioinformatics-e1b55f000b82e2c598735fb62f1ea933e5155c68.tar.gz
gn: genenetwork-qc: Update to 0.0.1-2.ae1fbc0.
* gn/packages/quality-control.scm (genenetwork-qc) Update to 0.0.1-2.ae1fbc0.
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/quality-control.scm24
1 files changed, 13 insertions, 11 deletions
diff --git a/gn/packages/quality-control.scm b/gn/packages/quality-control.scm
index 2cf5d5f..fae5999 100644
--- a/gn/packages/quality-control.scm
+++ b/gn/packages/quality-control.scm
@@ -132,7 +132,7 @@ delimited text files:
(sbcl-package->ecl-package sbcl-qc-uploads))
(define-public genenetwork-qc
- (let ((commit "4808ae57ac83ef00e679c94fe6844c72f18735b9")
+ (let ((commit "ae1fbc0c56c8732fb85b555eccd4fddb5d8e5437")
(revision "2"))
(package
(name "genenetwork-qc")
@@ -142,10 +142,11 @@ delimited text files:
(method git-fetch)
(uri
(git-reference
- (url "https://git.genenetwork.org/fredmanglis/gnqc_py.git")
+ ;;(url "https://git.genenetwork.org/fredmanglis/gnqc_py.git")
+ (url "https://gitlab.com/fredmanglis/gnqc_py.git")
(commit commit)))
(sha256
- (base32 "14lbdbkqa5aiwldafirgqsfcydbqqbhz30vrf80afxj9sqxcscd9"))))
+ (base32 "1161d5860x1fvmpwcbqnv637gzcwhclw4p1qf435yg9lx4j4690y"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -155,15 +156,16 @@ delimited text files:
(when tests?
(invoke "pytest")))))))
(inputs
- (list
- python-mypy
- python-pylint
- python-pytest
- python-hypothesis))
+ (list redis
+ python-mypy
+ python-pylint
+ python-pytest
+ python-hypothesis))
(propagated-inputs
- (list
- python-rq
- python-magic))
+ (list python-redis
+ python-flask
+ python-jsonpickle
+ python-mysqlclient))
(synopsis "GeneNetwork Quality Control Application")
(description
"GeneNetwork qc is a quality control application for the data files that