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authorPjotr Prins2017-05-14 07:49:23 -0500
committerPjotr Prins2017-05-14 07:49:23 -0500
commitb7a773c852b17fe0e58016f428044538ffb7799f (patch)
treec9ba6652c084da15f86bd1a80604053017dab931 /gn
parentfe677927f21d858c74763389deded40b79d85095 (diff)
downloadguix-bioinformatics-b7a773c852b17fe0e58016f428044538ffb7799f.tar.gz
Updating guix
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/afnumpy.scm2
-rw-r--r--gn/packages/bioinformatics.scm2
-rw-r--r--gn/packages/gemma.scm2
-rw-r--r--gn/packages/genenetwork.scm4
-rw-r--r--gn/packages/python.scm2
5 files changed, 6 insertions, 6 deletions
diff --git a/gn/packages/afnumpy.scm b/gn/packages/afnumpy.scm
index 55c05ad..d5515ac 100644
--- a/gn/packages/afnumpy.scm
+++ b/gn/packages/afnumpy.scm
@@ -42,7 +42,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages readline)
#:use-module (gnu packages statistics)
- #:use-module (gnu packages texlive)
+ #:use-module (gnu packages tex)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages tls)
#:use-module (gnu packages web)
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index 13eda3a..376b43a 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -27,7 +27,7 @@
#:use-module (gnu packages compression)
#:use-module (gnu packages cpio)
#:use-module (gnu packages curl)
- #:use-module (gnu packages doxygen)
+ #:use-module (gnu packages documentation)
#:use-module (gnu packages datastructures)
#:use-module (gnu packages check)
#:use-module (gnu packages file)
diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm
index bd8adf1..35ed294 100644
--- a/gn/packages/gemma.scm
+++ b/gn/packages/gemma.scm
@@ -25,7 +25,7 @@
#:use-module (gnu packages compression)
#:use-module (gnu packages cpio)
#:use-module (gnu packages curl)
- #:use-module (gnu packages doxygen)
+ #:use-module (gnu packages documentation)
#:use-module (gnu packages datastructures)
#:use-module (gnu packages check)
#:use-module (gnu packages file)
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index a7350a2..df18955 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -175,7 +175,7 @@ location of a putative QTL.")
(license license:agpl3+))))
(define-public genenetwork2
- (let ((commit "edfb1d0cc19e3734c8e8acd7c74d76aff1bc76f9"))
+ (let ((commit "48c04bb5c6a8d974697f6904857ebd377c4c0ce5"))
(package
(name "genenetwork2")
(version (string-append "2.10rc2-" (string-take commit 7) ))
@@ -188,7 +188,7 @@ location of a putative QTL.")
(file-name (string-append name "-" (string-take commit 7)))
(sha256
(base32
- "12d2hp5529h9i6f5yarzkhprya8nv7gzvscd4m64s777hlz3hj31"))))
+ "0mwhq3w436xk57p02kjwmjl2xjbi3m1s0a6m2qk54bpr1k50zxqi"))))
(propagated-inputs `( ;; propagated for development purposes
("python" ,python-2) ;; probably superfluous
("r" ,r)
diff --git a/gn/packages/python.scm b/gn/packages/python.scm
index 9e38576..7804a23 100644
--- a/gn/packages/python.scm
+++ b/gn/packages/python.scm
@@ -26,7 +26,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages readline)
#:use-module (gnu packages statistics)
- #:use-module (gnu packages texlive)
+ #:use-module (gnu packages tex)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages tls)
#:use-module (gnu packages web)