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authorPjotr Prins2017-08-21 07:52:25 -0500
committerPjotr Prins2017-08-21 07:52:25 -0500
commite50493dc409464bacaa06775418c32be3f1aacf5 (patch)
treeccfa5622e00e10ae6b0ed0d96336968beb400bd5 /gn
parent5a9fa677517f1708e21ee14dcbea59ae4ec7ce08 (diff)
downloadguix-bioinformatics-e50493dc409464bacaa06775418c32be3f1aacf5.tar.gz
Fixes for latest Guix
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/phewas.scm9
1 files changed, 5 insertions, 4 deletions
diff --git a/gn/packages/phewas.scm b/gn/packages/phewas.scm
index 2bd832e..59269ef 100644
--- a/gn/packages/phewas.scm
+++ b/gn/packages/phewas.scm
@@ -19,6 +19,7 @@
#:use-module (gnu packages boost)
#:use-module (gnu packages compression)
#:use-module (gnu packages cpio)
+ #:use-module (gnu packages cran)
#:use-module (gnu packages file)
#:use-module (gnu packages gcc)
#:use-module (gnu packages java)
@@ -117,14 +118,14 @@ genome-wide association studies in structured populations.")
(define-public r-fgsea
(package
(name "r-fgsea")
- (version "1.0.2")
+ (version "1.2.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "fgsea" version))
(sha256
(base32
- "1yq4s4g4xxzcpkv9dpbg29444iy38vfgwj4wgr47rjjq8njfblfx"))))
+ "1vl9i889800avi8valkl0bz9jrjz71anzmal245ls9gwydrv0dpc"))))
(build-system r-build-system)
; (native-inputs
; `(("gfortran" ,gfortran)))
@@ -145,14 +146,14 @@ genome-wide association studies in structured populations.")
(define-public r-qvalue
(package
(name "r-qvalue")
- (version "2.6.0")
+ (version "2.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "qvalue" version))
(sha256
(base32
- "1dijh11v1kr29gnikq09pkdvm3qwmp1a406ahx9l4j6mgn8hlsfq"))))
+ "1dxdwa767a9r8n61r272ypi09qblcdfpzzwkmri74y5mbp1r3y4i"))))
(build-system r-build-system)
(propagated-inputs
`(("r-reshape2" ,r-reshape2)