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authorPjotr Prins2021-05-12 19:40:05 +0000
committerPjotr Prins2021-05-12 19:40:05 +0000
commit3b5b8fa48f2231e723909298bdf7f91dbee6a213 (patch)
treeea13a860160410920919ba4b5d5df7d459bbc0a4 /gn
parente45cc234ac38ca46bbf63d34a04114d037620c12 (diff)
downloadguix-bioinformatics-3b5b8fa48f2231e723909298bdf7f91dbee6a213.tar.gz
Made python3-genenetwork2 the default!
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/genenetwork.scm14
1 files changed, 7 insertions, 7 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 3e94fa0..78e2893 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -253,10 +253,10 @@ implemented, light on server resource usage, and fairly speedy.")
Graphical Fragment Assembly} files and related formats.")
(license license:expat)))
-(define-public genenetwork2
+(define-public python2-genenetwork2
(let ((commit "1538ffd33af19e6ac922b4ee85fe701408968dfd"))
(package
- (name "genenetwork2")
+ (name "python2-genenetwork2")
(version (string-append "2.11-guix-" (string-take commit 7) ))
(source (origin
(method git-fetch)
@@ -454,11 +454,11 @@ Graphical Fragment Assembly} files and related formats.")
(description "GeneNetwork3 API for data science and machine learning.")
(license license:agpl3+))))
-(define-public python3-genenetwork2
+(define-public genenetwork2
(let ((commit "84cbf35adbb15c79638372d108308edb05f12683"))
(package
- (inherit genenetwork2)
- (name "python3-genenetwork2")
+ (inherit python2-genenetwork2)
+ (name "genenetwork2")
(version (string-append "3.11-guix-" (string-take commit 7) ))
(source (origin
(method git-fetch)
@@ -472,7 +472,7 @@ Graphical Fragment Assembly} files and related formats.")
(native-inputs
`(("graphviz" ,graphviz)))
(propagated-inputs
- (let ((inputs (package-propagated-inputs genenetwork2)))
+ (let ((inputs (package-propagated-inputs python2-genenetwork2)))
`(,@(fold
alist-delete inputs
(map car
@@ -520,7 +520,7 @@ Graphical Fragment Assembly} files and related formats.")
("python-xlsxwriter" ,python-xlsxwriter))))
(arguments
(let ((python (specification->package "python-wrapper"))
- (args (package-arguments genenetwork2)))
+ (args (package-arguments python2-genenetwork2)))
(substitute-keyword-arguments args
((#:python _) python)
((#:phases phases)