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authorpjotrp2020-05-06 10:12:12 -0500
committerpjotrp2020-05-06 10:12:12 -0500
commit163385ed0f3d954dc9d0f834a676f0bb182ce72d (patch)
tree0fd79ecdbe655e10d3116c84ef561d194d6d9485 /gn
parenta26d7f7eacefcd4c3b2339f81d99218f4b36dc69 (diff)
downloadguix-bioinformatics-163385ed0f3d954dc9d0f834a676f0bb182ce72d.tar.gz
define-public python-cfgraph
define-public python-pbr define-public python-pyshex
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/python.scm71
1 files changed, 71 insertions, 0 deletions
diff --git a/gn/packages/python.scm b/gn/packages/python.scm
index 7e4786f..66d8d60 100644
--- a/gn/packages/python.scm
+++ b/gn/packages/python.scm
@@ -1183,3 +1183,74 @@ object identifiers, object references, documentation generation, code
generation, and transformation to RDF. Salad provides a bridge between document
and record oriented data modeling and the Semantic Web.")
(license license:asl2.0)))
+
+(define-public python-cfgraph
+ (package
+ (name "python-cfgraph")
+ (version "0.2.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "CFGraph" version))
+ (sha256
+ (base32
+ "0x7yz0lvqb6mkhl5fbml27sppmscgpf8v2ism9jzzf0h982ffzxm"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-rdflib" ,python-rdflib)))
+ (home-page "http://github.com/hsolbrig/CFGraph")
+ (synopsis "rdflib collections flattening graph")
+ (description
+ "rdflib collections flattening graph")
+ (license license:asl2.0)))
+
+(define-public python-pbr
+ (package
+ (name "python-pbr")
+ (version "5.4.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pbr" version))
+ (sha256
+ (base32
+ "0p7mkfgjvqmkn93qpp8kr8mmc06cvxka6x3lhnpmrc1krvz5ix87"))))
+ (arguments
+ `(#:tests? #f)) ; tests not working
+ (build-system python-build-system)
+ (home-page
+ "https://docs.openstack.org/pbr/latest/")
+ (synopsis "Python Build Reasonableness")
+ (description "Python Build Reasonableness")
+ (license #f)))
+
+
+(define-public python-pyshex
+ (package
+ (name "python-pyshex")
+ (version "0.7.14")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "PyShEx" version))
+ (sha256
+ (base32
+ "1fy664bh6hpmr4cf49fwwxng36kv7s6b2986hbv0cqcypc4ri2cs"))))
+ (arguments
+ `(#:tests? #f)) ; tests not working
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-cfgraph" ,python-cfgraph)
+ ; ("python-pyshexc" ,python-pyshexc)
+ ("python-rdflib" ,python-rdflib)
+ ("python-pbr" ,python-pbr)
+ ("python-rdflib-jsonld" ,python-rdflib-jsonld)
+ ("python-requests" ,python-requests)
+ ; ("python-shexjsg" ,python-shexjsg)
+ ; ("python-sparql-slurper" ,python-sparql-slurper)
+ ; ("python-sparqlwrapper" ,python-sparqlwrapper)
+ ("python-urllib3" ,python-urllib3)))
+ (home-page "https://github.com/hsolbrig/PyShEx")
+ (synopsis "Python ShEx Implementation")
+ (description "Python ShEx Implementation")
+ (license license:asl2.0)))