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author | Efraim Flashner | 2021-07-05 01:28:58 -0500 |
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committer | Efraim Flashner | 2021-07-05 01:29:25 -0500 |
commit | b0a390360045c7c29a17593c76611bcb96d66984 (patch) | |
tree | 21aff5fb3fe5f38fa40f34677a02d22624239f28 /gn | |
parent | f8d1f89c9276733b4a1166b797f07a8af70b125b (diff) | |
download | guix-bioinformatics-b0a390360045c7c29a17593c76611bcb96d66984.tar.gz |
gn: Add genecup-HEAD.
Diffstat (limited to 'gn')
-rw-r--r-- | gn/packages/ratspub.scm | 29 |
1 files changed, 23 insertions, 6 deletions
diff --git a/gn/packages/ratspub.scm b/gn/packages/ratspub.scm index 448cda8..9139606 100644 --- a/gn/packages/ratspub.scm +++ b/gn/packages/ratspub.scm @@ -1,5 +1,6 @@ (define-module (gn packages ratspub) #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix git) #:use-module (guix utils) #:use-module (gnu packages) #:use-module (guix packages) @@ -278,12 +279,6 @@ if __name__ == '__main__': (url "https://github.com/hakangunturkun/GeneCup") (commit (string-append "v" version)))) (file-name (git-file-name name version)) - ;; Change the port for running the service. - (modules '((guix build utils))) - (snippet - '(begin (substitute* "server.py" - (("4200") "4204")) - #t)) (sha256 (base32 "0krrwnr4yjqpafllwx1xg6cjk1j683bdmkyqq848plzlqx2cl72c")))) (build-system python-build-system) @@ -293,6 +288,12 @@ if __name__ == '__main__': (modify-phases %standard-phases (delete 'configure) (delete 'build) + ;; Change the port for running the service. + (add-after 'unpack 'use-different-port + (lambda _ + (substitute* "server.py" + (("4200") "4204")) + #t)) (add-after 'unpack 'make-files-writable (lambda _ (for-each make-file-writable (find-files ".")))) @@ -401,8 +402,24 @@ into an ontology. The users create an ontology by identifying categories of concepts and a list of keywords for each concept.") (license license:expat))) +(define genecup-master + (package + (inherit genecup) + (name "genecup-master") + (version "HEAD-of-master-branch") + (source + (git-checkout + (url "https://github.com/hakangunturkun/GeneCup") + (branch "master"))))) + (define-public genecup-with-tensorflow-native (package (inherit (tensowflow-native-instead-of-tensorflow genecup)) (name "genecup-with-tensorflow-native"))) + +(define-public genecup-latest-with-tensorflow-native + (package + (inherit + (tensowflow-native-instead-of-tensorflow genecup-master)) + (name "genecup-latest-with-tensorflow-native"))) |