diff options
author | Dennis E. Mungai | 2016-03-19 14:08:47 +0300 |
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committer | Dennis E. Mungai | 2016-03-19 14:08:47 +0300 |
commit | 52516f78d847eb3a770b75800471d6ef6688b1a5 (patch) | |
tree | 717448eb05466fabed18b044e96cd90c047f66d2 /gn | |
parent | 10864b70d6ab88b2efe479be8beff1ee8a8503d4 (diff) | |
download | guix-bioinformatics-52516f78d847eb3a770b75800471d6ef6688b1a5.tar.gz |
Broken build, still cannot detect Boost.Compute
To be fixed. To build, you need to disable the OpenCL back-end.
Diffstat (limited to 'gn')
-rw-r--r-- | gn/packages/arrayfire.scm | 144 |
1 files changed, 143 insertions, 1 deletions
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm index a581389..5339030 100644 --- a/gn/packages/arrayfire.scm +++ b/gn/packages/arrayfire.scm @@ -37,9 +37,11 @@ #:use-module (gnu packages video) #:use-module (gnu packages textutils) #:use-module (gnu packages gl) + #:use-module (gnu packages gcc) #:use-module (gnu packages gnupg) #:use-module (gnu packages pkg-config) #:use-module (gnu packages maths) + #:use-module (gnu packages mpi) #:use-module (gnu packages web) #:use-module (gnu packages wget) #:use-module (gnu packages python) @@ -70,7 +72,10 @@ ("pkg-config" ,pkg-config))) (inputs `(("boost" ,boost) ("glfw" ,glfw) + ("compute" ,compute) ("curl" ,curl) + ("clBLAS" ,clBLAS) + ("clFFT" ,clFFT) ("atlas" ,atlas) ("dbus" ,dbus) ("opencl-headers" ,opencl-headers) @@ -100,7 +105,7 @@ ("cmake" ,cmake))) (build-system cmake-build-system) (arguments - `(#:configure-flags '("-DBUILD_OPENCL=OFF" "-DBUILD_CUDA=OFF" "-DBUILD_GRAPHICS=OFF") + `(#:configure-flags '("-DBUILD_OPENCL=ON" "-DBUILD_CUDA=OFF" "-DBUILD_GRAPHICS=OFF") #:tests? #f)) (synopsis "ArrayFire: a general purpose GPU library. https://arrayfire.com") (description "ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple.") @@ -152,6 +157,139 @@ (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") (license (list license:gpl2)))) +(define-public clBLAS + (package + (name "clBLAS") + (version "v2.10") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/clMathLibraries/clBLAS/archive/" + version ".tar.gz")) + (sha256 + (base32 + "0adlb02lqzrklfybhnv4n0p37mvkvdi3vqiwa05x2mv05ywnr93j")))) + (build-system cmake-build-system) + (arguments `(#:tests? #f + #:configure-flags '("../clBLAS-2.10/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release" "-DBUILD_TEST=OFF"))) + (native-inputs `(("autoconf" ,autoconf) + ("automake" ,automake) + ("cmake" ,cmake) + ("gfortran" ,gfortran) + ("libtool" ,libtool) + ("pkg-config" ,pkg-config))) + (inputs `(("curl" ,curl) + ("dbus" ,dbus) + ("boost" ,boost) + ("enca" ,enca) + ("eudev" ,eudev) + ("fftw-openmpi" ,fftw-openmpi) + ("glew" ,glew) + ("libcap" ,libcap) + ("libjpeg" ,libjpeg) + ("libltdl" ,libltdl) + ("libtiff" ,libtiff) + ("mesa-utils" ,mesa-utils) + ("openmpi" ,openmpi) + ("ocl-icd" ,ocl-icd) + ("opencl-headers" ,opencl-headers) + ("randrproto" ,randrproto) + ("libxrandr" ,libxrandr) + ("xineramaproto" ,xineramaproto) + ("libxinerama" ,libxinerama) + ("libxcursor" ,libxcursor) + ("python" ,python-2))) + (home-page "http://www.glfw.org/") + (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (license (list license:gpl2)))) + +(define-public clFFT + (package + (name "clFFT") + (version "v2.10.1") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/clMathLibraries/clFFT/archive/" + version ".tar.gz")) + (sha256 + (base32 + "19hrk1lf06kch8x9dpbdj0waycn2mldrmj2y4vzi7zn2gdfw6g73")))) + (build-system cmake-build-system) + (arguments `(#:configure-flags '("../clFFT-2.10.1/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f)) + (native-inputs `(("autoconf" ,autoconf) + ("automake" ,automake) + ("cmake" ,cmake) + ("libtool" ,libtool) + ("pkg-config" ,pkg-config))) + (inputs `(("curl" ,curl) + ("dbus" ,dbus) + ("enca" ,enca) + ("eudev" ,eudev) + ("fftw-openmpi" ,fftw-openmpi) + ("glew" ,glew) + ("libcap" ,libcap) + ("libjpeg" ,libjpeg) + ("libltdl" ,libltdl) + ("libtiff" ,libtiff) + ("mesa-utils" ,mesa-utils) + ("openmpi" ,openmpi) + ("ocl-icd" ,ocl-icd) + ("opencl-headers" ,opencl-headers) + ("randrproto" ,randrproto) + ("libxrandr" ,libxrandr) + ("xineramaproto" ,xineramaproto) + ("libxinerama" ,libxinerama) + ("libxcursor" ,libxcursor) + ("python" ,python-2))) + (home-page "http://www.glfw.org/") + (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (license (list license:gpl2)))) + +(define-public compute + (package + (name "compute") + (version "v0.5") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/boostorg/compute/archive/" + version ".tar.gz")) + (sha256 + (base32 + "1r16zd1wdnn9gx278mkvr13k3i79hr35v6vj0fn7v3n92ngwxnhd")))) + (build-system cmake-build-system) + (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f)) + (native-inputs `(("autoconf" ,autoconf) + ("automake" ,automake) + ("cmake" ,cmake) + ("libtool" ,libtool) + ("pkg-config" ,pkg-config))) + (inputs `(("curl" ,curl) + ("dbus" ,dbus) + ("enca" ,enca) + ("eudev" ,eudev) + ("fftw-openmpi" ,fftw-openmpi) + ("glew" ,glew) + ("boost" ,boost) + ("libcap" ,libcap) + ("libjpeg" ,libjpeg) + ("libltdl" ,libltdl) + ("libtiff" ,libtiff) + ("mesa-utils" ,mesa-utils) + ("openmpi" ,openmpi) + ("opencl-headers" ,opencl-headers) + ("ocl-icd" ,ocl-icd) + ("randrproto" ,randrproto) + ("libxrandr" ,libxrandr) + ("xineramaproto" ,xineramaproto) + ("libxinerama" ,libxinerama) + ("libxcursor" ,libxcursor) + ("python" ,python-2))) + (home-page "http://boost.org") + (synopsis "Peer-reviewed portable C++ source libraries,BoostCompute") + (description "Peer-reviewed portable C++ source libraries,BoostCompute") + (license (list license:x11-style)))) + (define-public ocl-icd (package (name "ocl-icd") @@ -217,4 +355,8 @@ (description "This package provides the Khronos OpenCL headers") (home-page "https://www.khronos.org/registry/cl/") (license (list license:gpl2))))) + + + + |