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authorEfraim Flashner2019-10-06 06:03:49 -0500
committerEfraim Flashner2019-10-06 06:03:49 -0500
commitcb55444671fd2334a606d360773b339ef6a2a6fe (patch)
tree56e76fc6201b4cf6ca8f5368a101b6df9d4ae1ae /gn
parentef235b539dfa07b275b6d01f1358b5e9983fdb8e (diff)
downloadguix-bioinformatics-cb55444671fd2334a606d360773b339ef6a2a6fe.tar.gz
gn: rust-qtlreaper: Update test results.core-updates
* gn/packages/genenetwork.scm (rust-qtlreaper)[arguments]: Add custom phase to update the expected test results with the new library versions.
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/genenetwork.scm12
1 files changed, 11 insertions, 1 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm
index 7e5a04e..b9ebcc4 100644
--- a/gn/packages/genenetwork.scm
+++ b/gn/packages/genenetwork.scm
@@ -206,7 +206,17 @@ location of a putative QTL.")
("rust-rayon" ,rust-rayon-1.0)
("rust-serde" ,rust-serde)
("rust-serde-json" ,rust-serde-json)
- ("rust-ndarray" ,rust-ndarray))))
+ ("rust-ndarray" ,rust-ndarray))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'update-test-data
+ (lambda _
+ (substitute* "src/geneobject.rs"
+ ;; array![Genotype::Unk, Genotype::Unk, Genotype::Pat]
+ (("0.3421367343627405") "0.3421367343627406")
+ ;; array![Genotype::Unk, Genotype::Unk, Genotype::Unk]
+ (("-0.3223330030526561") "-0.32233300305265566"))
+ #t)))))
(home-page "https://github.com/chfi/rust-qtlreaper")
(synopsis "Reimplementation of genenetwork/QTLReaper in Rust")
(description "Reimplementation of genenetwork/QTLReaper in Rust")