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authorpjotrp2017-02-02 08:15:18 +0000
committerpjotrp2017-02-02 08:15:18 +0000
commitea1ce997a5e43e1993864464e1a1d45e9b20c8db (patch)
tree09f8c17e96d86ef3ef9602da4ce05ce6f44a2abb /gn
parent0c6ee6e845def194d50021eec528059671e04cd3 (diff)
downloadguix-bioinformatics-ea1ce997a5e43e1993864464e1a1d45e9b20c8db.tar.gz
Patching Druntime for sambamba
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/bioinformatics.scm2
-rw-r--r--gn/packages/ldc.scm9
2 files changed, 6 insertions, 5 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index 4ded90e..2dcaf62 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -924,7 +924,7 @@ association studies (GWAS).")
   (let ((commit "91096e78c81162f855b1044a4b2d41895bd27262"))
     (package
       (name "sambamba")
-      (version (string-append "0.6.6-pre1-" (string-take commit 7)))
+      (version (string-append "0.6.6-pre2-" (string-take commit 7)))
       (source (origin
         (method git-fetch)
         (uri (git-reference
diff --git a/gn/packages/ldc.scm b/gn/packages/ldc.scm
index 3fb77b7..fec94e9 100644
--- a/gn/packages/ldc.scm
+++ b/gn/packages/ldc.scm
@@ -177,6 +177,7 @@
                    "https://github.com/ldc-developers/druntime/archive/ldc-v"
                    version2 ".tar.gz"))
              (file-name (string-append "ldc-druntime-" version2 ".tar.gz"))
+             (patches (search-patches "ldc-druntime-finiTLSRanges.patch"))
              (sha256
               (base32
                "07qvrqj6vgakd6qr4x5f70w6zwkzd1li5x8i1b5ywnds1z5lnfp6"))))
@@ -202,10 +203,10 @@
                 (uri (string-append
                     "https://github.com/dlang/tools/archive/"
                     version ".tar.gz"))
-              (file-name (string-append name "-" version ".tar.gz"))
-              (sha256
-               (base32
-                "0ryn4fv1mj8c8d7y4lrr43baahl3z7sk5bryj9kd829paz573va6"))))
+                (file-name (string-append name "-" version ".tar.gz"))
+                (sha256
+                 (base32
+                  "0ryn4fv1mj8c8d7y4lrr43baahl3z7sk5bryj9kd829paz573va6"))))
       (build-system gnu-build-system)
       (arguments
        '(#:phases