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author | Dennis E. Mungai | 2016-03-18 05:21:29 +0300 |
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committer | Dennis E. Mungai | 2016-03-18 05:21:29 +0300 |
commit | f35792af6aed186484bce9a361b8d2bc1116161b (patch) | |
tree | 4219cdc365de508048cdb51cdc1134de13f0a991 /gn | |
parent | 88b8a6c91c482b419e6a36301d7b84745c19157f (diff) | |
download | guix-bioinformatics-f35792af6aed186484bce9a361b8d2bc1116161b.tar.gz |
Bump version to v3.3.3
Also change licensing schema with #prefix (es).
Solves namespace problems.
Also added wget as an input (As it's needed as a fallback incase checksums for Boost are invalid).
Diffstat (limited to 'gn')
-rw-r--r-- | gn/packages/arrayfire.scm | 99 |
1 files changed, 89 insertions, 10 deletions
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm index 7756a97..b94a0ac 100644 --- a/gn/packages/arrayfire.scm +++ b/gn/packages/arrayfire.scm @@ -17,14 +17,17 @@ ;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. (define-module (gn packages arrayfire) - #:use-module ((guix licenses)) + #:use-module ((guix licenses) #:prefix license:) #:use-module (guix download) #:use-module (guix git-download) #:use-module (guix build-system gnu) #:use-module (guix build-system cmake) #:use-module (guix packages) + #:use-module (gnu packages) + #:use-module (guix utils) #:use-module (gnu packages algebra) #:use-module (gnu packages autotools) + #:use-module (gnu packages bootstrap) #:use-module (gnu packages curl) #:use-module (gnu packages gawk) #:use-module (gnu packages cmake) @@ -34,20 +37,23 @@ #:use-module (gnu packages video) #:use-module (gnu packages textutils) #:use-module (gnu packages gl) + #:use-module (gnu packages gnupg) #:use-module (gnu packages pkg-config) #:use-module (gnu packages maths) #:use-module (gnu packages web) - #:use-module (gnu packages ldc) + #:use-module (gnu packages wget) #:use-module (gnu packages python) + #:use-module (gnu packages ruby) #:use-module (gnu packages xorg) - #:use-module (gnu packages version-control) + #:use-module (gnu packages version-control) + #:use-module (gnu packages zip) #:use-module (gnu packages linux)) (define-public arrayfire -(let ((commit "9ca1ea0")) +(let ((commit "e118bf2")) (package (name "arrayfire") - (version "3.3.1-hotfix") + (version "3.3.3") (source (origin (method git-fetch) (uri (git-reference @@ -56,12 +62,15 @@ (file-name (string-append name "-" commit)) (sha256 (base32 - "067y98a9s78vpz7xsg889xnwfaza7c5gdv97yg9cgrdl0iljvsgp")))) + "050lwbl31spia17n9yq70z86x5inrahsd0y781g46a8ry2psviyj")))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) ("cmake" ,cmake) ("gawk" ,gawk) + ("git" ,git) + ("wget" ,wget) ("glew" ,glew) + ("git" ,git) ("libtool" ,libtool) ("pkg-config" ,pkg-config))) (inputs `(("boost" ,boost) @@ -69,11 +78,14 @@ ("curl" ,curl) ("atlas" ,atlas) ("dbus" ,dbus) + ("opencl-headers" ,opencl-headers) + ("ocl-icd" ,ocl-icd) ("enca" ,enca) ("eudev" ,eudev) ("glew" ,glew) ("glib" ,glib) ("lapack" ,lapack) + ("scalapack" ,scalapack) ("libcap" ,libcap) ("libjpeg" ,libjpeg) ("libltdl" ,libltdl) @@ -82,21 +94,21 @@ ("mesa-utils" ,mesa-utils) ("python" ,python-2) ("freeimage" ,freeimage) + ("freeglut" ,freeglut) ("fftw" ,fftw) ("fftwf" ,fftwf) ("fftw-openmpi" ,fftw-openmpi) ("glew" ,glew) ("glu" ,glu) ("openblas" ,openblas) - ("git" ,git) ("cmake" ,cmake))) (build-system cmake-build-system) (arguments - `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release" "-DBUILD_OPENCL=OFF" "-DBUILD_GRAPHICS=OFF") #:tests? #f)) + `(#:configure-flags '("-DBUILD_OPENCL=ON" "-DBUILD_GRAPHICS=OFF") #:tests? #f)) (synopsis "ArrayFire: a general purpose GPU library. https://arrayfire.com") (description "ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple.") (home-page "http://arrayfire.com/") - (license (list gpl2 gpl2+ gpl3 gpl3+))))) + (license (list license:gpl2 license:gpl2+ license:gpl3 license:gpl3+))))) (define-public glfw (package @@ -114,6 +126,7 @@ (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) ("cmake" ,cmake) + ("git" ,git) ("libtool" ,libtool) ("libpthread-stubs" ,libpthread-stubs) ("pkg-config" ,pkg-config))) @@ -136,5 +149,71 @@ (home-page "http://www.glfw.org/") (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") - (license (list gpl2)))) + (license (list license:gpl2)))) + +(define-public ocl-icd + (package + (name "ocl-icd") + (version "2.2.9") + (source (origin + (method url-fetch) + (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc")))) + (inputs `(("zip" ,zip) + ("autoconf" ,autoconf) + ("automake" ,automake) + ("ruby" ,ruby) + ("libtool" ,libtool) + ("opencl-headers" ,opencl-headers) + ("libgcrypt" ,libgcrypt))) + (build-system gnu-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'unpack `bootstrap + (lambda _ + (zero? (system* "autoreconf" "-vfi"))))))) + (home-page "https://forge.imag.fr/projects/ocl-icd/") + (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).") + (description "OpenCL implementations are provided as ICD (Installable Client Driver). + An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project. + This free ICD Loader can load any (free or non free) ICD") + (license (list license:gpl2 license:ruby)))) + +(define-public opencl-headers +(let ((commit "c1770dc")) + (package + (name "opencl-headers") + (version (string-append "2.1-" commit )) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/KhronosGroup/OpenCL-Headers.git") + (commit commit))) + (file-name (string-append name "-" commit)) + (sha256 + (base32 + "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck")))) + (propagated-inputs '()) + (inputs '()) + (native-inputs '()) + (build-system gnu-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (delete 'check) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (copy-recursively "." (string-append + (assoc-ref outputs "out") + "/include/CL"))))))) + (synopsis "The Khronos OpenCL headers") + (description "This package provides the Khronos OpenCL headers") + (home-page "https://www.khronos.org/registry/cl/") + (license (list license:gpl2))))) |