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| author | BonfaceKilz | 2020-12-02 00:03:09 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-12-02 00:03:09 +0300 |
| commit | 18082c3bdd42edfb6afc97f96a80744874c27986 (patch) | |
| tree | ae7df149adf06db8c8a631f6588fc5489044e54d /gn | |
| parent | 1d456b37cabefe6caa94cab22e952622c0d26c1f (diff) | |
| download | guix-bioinformatics-18082c3bdd42edfb6afc97f96a80744874c27986.tar.gz | |
gn: python3-genenetwork2: Generate static dependencies file
* gn/packages/genenetwork.scm (python3-genenetwork2):
[arguments]{generate-dependency-file}: Add new phase after "install" that
generates a "DEPENDENCY.md" file which will be displayed in the gn2 web
interface.
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/genenetwork.scm | 35 |
1 files changed, 32 insertions, 3 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 1e15cbb..24e3732 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -495,9 +495,38 @@ Graphical Fragment Assembly} files and related formats.") (("grep") (which "grep")) (("rm") (which "rm")) (("which") (which "which"))) - #t)))) - )) - )))) + #t)) + (add-after 'install 'generate-dependency-file + (lambda* (#:key inputs outputs #:allow-other-keys) + (call-with-output-file + (string-append + (assoc-ref outputs "out") + "/lib/python3.8/site-packages" + "/wqflask/DEPENDENCIES.md") + (lambda (port) + (format + port " +#### System Inputs (generated from ~a package ~a) +|Name | Description | +|-----|-------------| +~a +" + ,(package-name this-package) + ,(package-version this-package) + ,(apply + string-append + (map + (lambda (input) + (let* ((pkg (cadr input)) + (name (package-name pkg)) + (version (package-version pkg)) + (home-page (package-home-page pkg)) + (description (package-synopsis pkg))) + (string-append + "| **[" name "](" home-page ")** v" + version"| " + description " |\n"))) + (package-propagated-inputs this-package)))))))))))))))) ;; ./pre-inst-env guix download http://files.genenetwork.org/raw_database/db_webqtl_s.zip ;; 0sscjh0wml2lx0mb43vf4chg9gpbfi7abpjxb34n3kyny9ll557x |