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author | Dennis E. Mungai | 2016-03-18 23:56:29 +0300 |
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committer | Dennis E. Mungai | 2016-03-18 23:56:29 +0300 |
commit | da665e5a94c59ff4cab6c7f3b88c102a3d15c968 (patch) | |
tree | b0c2452ebd66a80f2aef292ddd13e6e287619d95 /gn | |
parent | 7ebae21b5b6d520c39cec12009f5e27e7839ad25 (diff) | |
download | guix-bioinformatics-da665e5a94c59ff4cab6c7f3b88c102a3d15c968.tar.gz |
Added clBLAS
Build fails due to googletest's missing target "install". Investigating.
Diffstat (limited to 'gn')
-rw-r--r-- | gn/packages/clBLAS.scm | 186 |
1 files changed, 186 insertions, 0 deletions
diff --git a/gn/packages/clBLAS.scm b/gn/packages/clBLAS.scm new file mode 100644 index 0000000..561ee2b --- /dev/null +++ b/gn/packages/clBLAS.scm @@ -0,0 +1,186 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com> +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. + +(define-module (gn packages clBLAS) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix download) + #:use-module (guix git-download) + #:use-module (guix build-system gnu) + #:use-module (guix build-system cmake) + #:use-module (guix packages) + #:use-module (gnu packages algebra) + #:use-module (gnu packages bootstrap) + #:use-module (gnu packages base) + #:use-module (gnu packages autotools) + #:use-module (gnu packages curl) + #:use-module (gnu packages gawk) + #:use-module (gnu packages cmake) + #:use-module (gnu packages boost) + #:use-module (gnu packages glib) + #:use-module (gnu packages image) + #:use-module (gnu packages video) + #:use-module (gnu packages textutils) + #:use-module (gnu packages gl) + #:use-module (gnu packages gcc) + #:use-module (gnu packages gnupg) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages maths) + #:use-module (gnu packages mpi) + #:use-module (gnu packages ruby) + #:use-module (gnu packages web) + #:use-module (gnu packages python) + #:use-module (gnu packages xorg) + #:use-module (gnu packages version-control) + #:use-module (gnu packages zip) + #:use-module (gnu packages linux)) + +(define-public clBLAS + (package + (name "clBLAS") + (version "v2.10") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/clMathLibraries/clBLAS/archive/" + version ".tar.gz")) + (sha256 + (base32 + "0adlb02lqzrklfybhnv4n0p37mvkvdi3vqiwa05x2mv05ywnr93j")))) + (build-system cmake-build-system) + (arguments `(#:configure-flags '("../clBLAS-2.10/src" "-DBUILD_SHARED_LIBS=ON" "-DCMAKE_BUILD_TYPE=Release") #:tests? #f)) + (native-inputs `(("autoconf" ,autoconf) + ("automake" ,automake) + ("cmake" ,cmake) + ("gfortran" ,gfortran) + ("libtool" ,libtool) + ("pkg-config" ,pkg-config))) + (inputs `(("curl" ,curl) + ("dbus" ,dbus) + ("enca" ,enca) + ("eudev" ,eudev) + ("fftw-openmpi" ,fftw-openmpi) + ("glew" ,glew) + ("googletest" ,googletest) + ("libcap" ,libcap) + ("libjpeg" ,libjpeg) + ("libltdl" ,libltdl) + ("libtiff" ,libtiff) + ("mesa-utils" ,mesa-utils) + ("openmpi" ,openmpi) + ("ocl-icd" ,ocl-icd) + ("openblas" ,openblas) + ("opencl-headers" ,opencl-headers) + ("randrproto" ,randrproto) + ("libxrandr" ,libxrandr) + ("xineramaproto" ,xineramaproto) + ("libxinerama" ,libxinerama) + ("libxcursor" ,libxcursor) + ("python" ,python-2))) + (home-page "http://www.glfw.org/") + (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.") + (license (list license:gpl2)))) + +(define-public ocl-icd + (package + (name "ocl-icd") + (version "2.2.9") + (source (origin + (method url-fetch) + (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc")))) + (inputs `(("zip" ,zip) + ("autoconf" ,autoconf) + ("automake" ,automake) + ("ruby" ,ruby) + ("libtool" ,libtool) + ("opencl-headers" ,opencl-headers) + ("libgcrypt" ,libgcrypt))) + (build-system gnu-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'unpack `bootstrap + (lambda _ + (zero? (system* "autoreconf" "-vfi"))))))) + (home-page "https://forge.imag.fr/projects/ocl-icd/") + (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).") + (description "OpenCL implementations are provided as ICD (Installable Client Driver). + An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project. + This free ICD Loader can load any (free or non free) ICD") + (license (list license:gpl2 license:ruby)))) + +(define-public opencl-headers +(let ((commit "c1770dc")) + (package + (name "opencl-headers") + (version (string-append "2.1-" commit )) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/KhronosGroup/OpenCL-Headers.git") + (commit commit))) + (file-name (string-append name "-" commit)) + (sha256 + (base32 + "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck")))) + (propagated-inputs '()) + (inputs '()) + (native-inputs '()) + (build-system gnu-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (delete 'check) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (copy-recursively "." (string-append + (assoc-ref outputs "out") + "/include/CL"))))))) + (synopsis "The Khronos OpenCL headers") + (description "This package provides the Khronos OpenCL headers") + (home-page "https://www.khronos.org/registry/cl/") + (license (list license:gpl2))))) + +(define-public googletest + (package + (name "googletest") + (version "1.7.0") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/google/googletest/archive/release-" + version ".tar.gz")) + (sha256 + (base32 + "1k0nf1l9cb3prdmsvaajl5i31bx86c1mw0d5jgzykz7rzm36afpp")))) + (build-system cmake-build-system) + (arguments `(#:configure-flags '("-DCMAKE_BUILD_TYPE=RelWithDebInfo") #:tests? #f)) + (inputs `(("automake" ,automake) + ("autoconf" ,autoconf) + ("libtool" ,libtool) + ("cmake" ,cmake) + ("python" ,python-2) + ("pkg-config" ,pkg-config))) + (home-page "https://github.com/google/googletest") + (synopsis "Google's C++ test framework") + (description "Google's C++ test framework") + (license (list license:gpl2)))) |