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authorRoel Janssen2016-02-29 16:03:40 +0100
committerRoel Janssen2016-02-29 16:03:40 +0100
commit3d81b81500bca24e46bf83eb9750bdec19dd6862 (patch)
treeecc589b0c1dc2446b2aa592ad11512b07ae0e0e4 /gn
parent096a48cfaacefcefee2db5924a5fe97d4fda1125 (diff)
downloadguix-bioinformatics-3d81b81500bca24e46bf83eb9750bdec19dd6862.tar.gz
Reverted htslib for Sambamba to the repository's version.
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/bioinformatics.scm11
1 files changed, 7 insertions, 4 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index cf79a08..3d27a72 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -495,11 +495,14 @@ and freshness without requiring additional information from the user.")
("htslib-src"
,(origin
(method url-fetch)
- (uri "https://github.com/samtools/htslib/archive/1.3.tar.gz")
- (file-name "htslib-1.3.tar.gz")
+ (uri (string-append "https://github.com/lomereiter/htslib/archive/"
+ "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5" ".tar.gz"))
+ ;;(uri "https://github.com/samtools/htslib/archive/1.3.tar.gz")
+ (file-name "htslib-2f3c3ea7b.tar.gz")
(sha256
- (base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9"))
- (patches (list (search-patch "htslib-add-cram_to_bam.patch")))))
+ (base32 "0bl6w856afnbgdsw8bybsxpqsyf2ba3f12rqh47hhpxvv866g08w"))))
+ ;;(base32 "1bqkif7yrqmiqak5yb74kgpb2lsdlg7y344qa1xkdg7k1l4m86i9"))
+ ;;(patches (list (search-patch "htslib-add-cram_to_bam.patch")))))
("biod-src"
,(origin
(method git-fetch)