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| author | Efraim Flashner | 2020-07-16 09:37:08 +0300 |
|---|---|---|
| committer | Efraim Flashner | 2020-07-16 09:37:08 +0300 |
| commit | 22af6bde5aa62b7f022fc1e76b413f3d7a2f3bc2 (patch) | |
| tree | aa29b1a6b72084090ea90e42a8ee82613c97e1bf /gn/services | |
| parent | da5edbdb6cea092ea74e5c738155e769b09086a3 (diff) | |
| download | guix-bioinformatics-22af6bde5aa62b7f022fc1e76b413f3d7a2f3bc2.tar.gz | |
gn: genenetwork1 container almost working
Diffstat (limited to 'gn/services')
| -rw-r--r-- | gn/services/genenetwork.scm | 39 |
1 files changed, 19 insertions, 20 deletions
diff --git a/gn/services/genenetwork.scm b/gn/services/genenetwork.scm index 0137e94..bf09270 100644 --- a/gn/services/genenetwork.scm +++ b/gn/services/genenetwork.scm @@ -82,23 +82,23 @@ (firmware '()) (packages (cons* python-2.4 - ;httpd-mod-python-24 - ;python24-qtlreaper - ;python24-htmlgen-GN1 - ;python24-json-GN1 - ;python24-piddle - ;python24-pyx-GN1 - ;python24-pyxlwriter - ;python24-svg-GN1 + python24-qtlreaper + python24-htmlgen-GN1 + python24-json-GN1 + python24-piddle + python24-pyx-GN1 + python24-pyxlwriter + python24-svg-GN1 %base-packages)) (services (list (service httpd-service-type (httpd-configuration - (package httpd22-mod-python-24) ; Must be httpd-2.2? + (package httpd22-mod-python-24) ; Must be httpd-2.2 (config (httpd-config-file (server-name "www.genenetwork.org") - (server-root httpd22-mod-python-24) ; Defaults to httpd, must be combo package. + ;; Defaults to httpd, largely irrelevant. + (server-root httpd22-mod-python-24) (user "nobody") (group "root") (pid-file "/tmp/httpd-genenetwork1") @@ -112,20 +112,19 @@ %default-httpd22-modules)) (extra-config (list "\ TypesConfig etc/httpd/mime.types -#for apache-2.2, ignored by apache-2.4 DefaultType application/octet-stream -# Should PythonPath just be genenetwork1/web/webqtl? -PythonPath \"sys.path+['" (file-append python-2.4 "/lib/python2.4") "', '" %mod-python-path "', '" (file-append genenetwork1 "/web/webqtl") "']\" -<Directory " (file-append genenetwork1 "/web/webqtl") "> - AddHandler mod_python .py - PythonHandler mod_python.publisher - PythonAutoReload Off +#DocumentRoot MUST NOT be in the PythonPath +PythonPath \"['/run/current-system/profile/lib/python2.4', '" httpd22-mod-python-24 "/lib/python2.4/site-packages']\" +<Directory " genenetwork1 "/web/webqtl> + #AddHandler mod_python .py + SetHandler python-program + #PythonHandler mod_python.publisher + PythonHandler mod_python.cgihandler + #PythonAutoReload Off + # only while debugging: PythonDebug On </Directory> <Location /mpinfo> SetHandler python-program PythonHandler mod_python.testhandler </Location>"))))))))) - -;PythonPath \"sys.path+['" (file-append python-2.4 "/lib/python2.4") "', '" %mod-python-path "', '" (file-append python24-qtlreaper %python-path) "', '" (file-append python24-json-GN1 %python-path) "', '" (file-append python24-piddle %python-path) "', '" (file-append python24-pyx-GN1 %python-path) "', '" (file-append python24-pyxlwriter-GN1 %python-path) "', '" (file-append python24-svg-GN1 %python-path) "', '" (file-append python24-htmlgen-GN1) "', '" (file-append genenetwork1 "/web/webqtl") "']\" -;PythonPath \"sys.path+['" (file-append python-2.4 "/lib/python2.4") "', '" %mod-python-path "', '" (file-append genenetwork1 "/web/webqtl") "']\" |