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authorEfraim Flashner2021-07-05 01:28:58 -0500
committerEfraim Flashner2021-07-05 01:29:25 -0500
commitb0a390360045c7c29a17593c76611bcb96d66984 (patch)
tree21aff5fb3fe5f38fa40f34677a02d22624239f28 /gn/packages
parentf8d1f89c9276733b4a1166b797f07a8af70b125b (diff)
downloadguix-bioinformatics-b0a390360045c7c29a17593c76611bcb96d66984.tar.gz
gn: Add genecup-HEAD.
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/ratspub.scm29
1 files changed, 23 insertions, 6 deletions
diff --git a/gn/packages/ratspub.scm b/gn/packages/ratspub.scm
index 448cda8..9139606 100644
--- a/gn/packages/ratspub.scm
+++ b/gn/packages/ratspub.scm
@@ -1,5 +1,6 @@
(define-module (gn packages ratspub)
#:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix git)
#:use-module (guix utils)
#:use-module (gnu packages)
#:use-module (guix packages)
@@ -278,12 +279,6 @@ if __name__ == '__main__':
(url "https://github.com/hakangunturkun/GeneCup")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
- ;; Change the port for running the service.
- (modules '((guix build utils)))
- (snippet
- '(begin (substitute* "server.py"
- (("4200") "4204"))
- #t))
(sha256
(base32 "0krrwnr4yjqpafllwx1xg6cjk1j683bdmkyqq848plzlqx2cl72c"))))
(build-system python-build-system)
@@ -293,6 +288,12 @@ if __name__ == '__main__':
(modify-phases %standard-phases
(delete 'configure)
(delete 'build)
+ ;; Change the port for running the service.
+ (add-after 'unpack 'use-different-port
+ (lambda _
+ (substitute* "server.py"
+ (("4200") "4204"))
+ #t))
(add-after 'unpack 'make-files-writable
(lambda _
(for-each make-file-writable (find-files "."))))
@@ -401,8 +402,24 @@ into an ontology. The users create an ontology by identifying categories of
concepts and a list of keywords for each concept.")
(license license:expat)))
+(define genecup-master
+ (package
+ (inherit genecup)
+ (name "genecup-master")
+ (version "HEAD-of-master-branch")
+ (source
+ (git-checkout
+ (url "https://github.com/hakangunturkun/GeneCup")
+ (branch "master")))))
+
(define-public genecup-with-tensorflow-native
(package
(inherit
(tensowflow-native-instead-of-tensorflow genecup))
(name "genecup-with-tensorflow-native")))
+
+(define-public genecup-latest-with-tensorflow-native
+ (package
+ (inherit
+ (tensowflow-native-instead-of-tensorflow genecup-master))
+ (name "genecup-latest-with-tensorflow-native")))