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authorjgart2022-01-13 06:35:30 -0500
committerjgart2022-01-13 07:11:01 -0500
commit2c1f46b298a76a4919cd79735e9e0f468b40788f (patch)
tree6ecf03dec8c4386deee4ba1342430d8c50f937f8 /gn/packages
parent534fc2340ee2fba9c592759d28c3aaf1ca199069 (diff)
downloadguix-bioinformatics-2c1f46b298a76a4919cd79735e9e0f468b40788f.tar.gz
gn: quality-control: Add utf-8-lineseparator.
* gn/packages/quality-control.scm: New file.
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/quality-control.scm42
1 files changed, 42 insertions, 0 deletions
diff --git a/gn/packages/quality-control.scm b/gn/packages/quality-control.scm
new file mode 100644
index 0000000..dfed55b
--- /dev/null
+++ b/gn/packages/quality-control.scm
@@ -0,0 +1,42 @@
+(define-module (gn packages quality-control)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix packages)
+ #:use-module (guix utils)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system gnu)
+ #:use-module (gnu packages))
+
+(define-public utf-8-lineseparator
+ (package
+ (name "utf-8-lineseparator")
+ (version "cj3")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/pflanze/utf-8-lineseparator")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1xnbcanqn5jr965gw9195ij6hz04clfm77m5776dysn9nykn20w1"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:make-flags
+ (list (string-append "CC=" ,(cc-for-target)))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (replace 'install
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin")))
+ (install-file "utf-8-lineseparator" bin)))))))
+ (home-page "https://github.com/pflanze/utf-8-lineseparator")
+ (synopsis "Line ending detection library")
+ (description
+ "@code{utf-8-lineseparator} provides a tool to efficiently check text
+(CSV) files for valid UTF-8 use, and to report which line endings
+they use.")
+ (license license:expat)))
+