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authorEfraim Flashner2020-02-06 04:37:45 -0600
committerEfraim Flashner2020-02-06 04:39:55 -0600
commit676e398c80788583aa5c555ffb03c5fcf433a9f3 (patch)
tree691285f4e3b77327d6291322c4bfd501a4e44127 /gn/packages
parent5eb0b0bdba3374cee96006cd1006603bbe13e36b (diff)
downloadguix-bioinformatics-676e398c80788583aa5c555ffb03c5fcf433a9f3.tar.gz
gn: ratspub: Patch javascript references
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/ratspub.scm28
1 files changed, 18 insertions, 10 deletions
diff --git a/gn/packages/ratspub.scm b/gn/packages/ratspub.scm
index 81959a0..29e1313 100644
--- a/gn/packages/ratspub.scm
+++ b/gn/packages/ratspub.scm
@@ -33,17 +33,13 @@
(add-after 'unpack 'patch-sources
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
- (cytoscape (assoc-ref inputs "cytoscape"))
- (bootstrap (assoc-ref inputs "bootstrap"))
(inetutils (assoc-ref inputs "inetutils")))
- ;; Source cannot find the substituted css currently.
- ;(substitute* "templates/cytoscape.html"
- ; (("script src=.*")
- ; (string-append "script src=\"" cytoscape
- ; "/share/genenetwork2/javascript/cytoscape/cytoscape.min.js\"></script>\n")))
- ;(substitute* "templates/layout.html"
- ; (("https://stackpath.bootstrapcdn.com/bootstrap/.*")
- ; (string-append bootstrap "/share/web/bootstrap/css/bootstrap.min.css\">\n")))
+ (substitute* "templates/cytoscape.html"
+ (("script src=.*")
+ "script src=\"/static/cytoscape.min.js\"></script>\n"))
+ (substitute* "templates/layout.html"
+ (("https://stackpath.bootstrapcdn.com/bootstrap/.*")
+ "/static/bootstrap.min.css\">\n"))
(substitute* "ratspub.py"
(("hostname") (string-append inetutils "/bin/hostname"))))
#t))
@@ -52,6 +48,18 @@
(let ((out (assoc-ref outputs "out")))
(copy-recursively "." out))
#t))
+ (add-after 'install 'install-javascript
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out"))
+ (cytoscape (assoc-ref inputs "cytoscape"))
+ (bootstrap (assoc-ref inputs "bootstrap")))
+ (symlink (string-append cytoscape
+ "/share/genenetwork2/javascript/cytoscape/cytoscape.min.js")
+ (string-append out "/static/cytoscape.min.js"))
+ (symlink (string-append bootstrap
+ "/share/web/bootstrap/css/bootstrap.min.css")
+ (string-append out "/static/bootstrap.min.css")))
+ #t))
(add-after 'install 'wrap-executable
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))