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authorEfraim Flashner2019-08-05 07:11:02 -0500
committerEfraim Flashner2019-08-05 07:12:58 -0500
commita2332e54719b069378fc2c54beae03e81aad97d4 (patch)
treea264200a13530fb61b009d963df6303a6293a69a /gn/packages
parente1880fa256769bd201ead3746d612fb3283211b0 (diff)
downloadguix-bioinformatics-a2332e54719b069378fc2c54beae03e81aad97d4.tar.gz
gn: remove some upstream packages
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/arrayfire.scm46
-rw-r--r--gn/packages/beignet.scm92
-rw-r--r--gn/packages/ocl-icd.scm67
-rw-r--r--gn/packages/opencl-headers.scm63
4 files changed, 1 insertions, 267 deletions
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm
index c230dc4..723444a 100644
--- a/gn/packages/arrayfire.scm
+++ b/gn/packages/arrayfire.scm
@@ -53,9 +53,7 @@
#:use-module (gnu packages xorg)
#:use-module (gnu packages version-control)
#:use-module (gnu packages linux)
- #:use-module (gnu packages opencl)
- #:use-module (gn packages ocl-headers)
- #:use-module (gn packages ocl-icd))
+ #:use-module (gnu packages opencl))
(define-public arrayfire
(package
@@ -121,48 +119,6 @@
license:gpl3
license:gpl3+))))
-(define-public glfw
- (package
- (name "glfw")
- (version "3.1.2")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/glfw/glfw/archive/"
- version ".tar.gz"))
- (sha256
- (base32
- "08pixv8hd5xsccf7l8cqcijjqaq4k4da8qbp77wggal2fq445ika"))))
- (build-system cmake-build-system)
- (arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
- #:tests? #f))
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("cmake" ,cmake)
- ("git" ,git)
- ("libtool" ,libtool)
- ("libpthread-stubs" ,libpthread-stubs)
- ("pkg-config" ,pkg-config)))
- (inputs `(("curl" ,curl)
- ("dbus" ,dbus)
- ("enca" ,enca)
- ("eudev" ,eudev)
- ("glew" ,glew)
- ("libcap" ,libcap)
- ("libjpeg" ,libjpeg)
- ("libltdl" ,libltdl)
- ("libtiff" ,libtiff)
- ("mesa-utils" ,mesa-utils)
- ("randrproto" ,randrproto)
- ("libxrandr" ,libxrandr)
- ("xineramaproto" ,xineramaproto)
- ("libxinerama" ,libxinerama)
- ("libxcursor" ,libxcursor)
- ("python" ,python-2)))
- (home-page "http://www.glfw.org/")
- (synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (description "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")
- (license (list license:gpl2))))
-
(define-public clBLAS
(package
(name "clBLAS")
diff --git a/gn/packages/beignet.scm b/gn/packages/beignet.scm
deleted file mode 100644
index ea099c4..0000000
--- a/gn/packages/beignet.scm
+++ /dev/null
@@ -1,92 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gn packages beignet)
- #:use-module ((guix licenses) #:prefix license:)
- #:use-module (guix download)
- #:use-module (guix git-download)
- #:use-module (guix build-system cmake)
- #:use-module (guix build-system gnu)
- #:use-module (guix packages)
- #:use-module (gnu packages)
- #:use-module (guix utils)
- #:use-module (gnu packages algebra)
- #:use-module (gnu packages autotools)
- #:use-module (gnu packages bootstrap)
- #:use-module (gnu packages gawk)
- #:use-module (gnu packages cmake)
- #:use-module (gnu packages compression)
- #:use-module (gnu packages glib)
- #:use-module (gnu packages gnupg)
- #:use-module (gnu packages llvm)
- #:use-module (gnu packages libedit)
- #:use-module (gnu packages video)
- #:use-module (gnu packages textutils)
- #:use-module (gnu packages gl)
- #:use-module (gnu packages ruby)
- #:use-module (gnu packages pkg-config)
- #:use-module (gnu packages maths)
- #:use-module (gnu packages web)
- #:use-module (gnu packages ncurses)
- #:use-module (gnu packages python)
- #:use-module (gnu packages xorg)
- #:use-module (gnu packages xdisorg)
- #:use-module (gnu packages version-control)
- #:use-module (gnu packages linux)
- #:use-module (gnu packages opencl)
- #:use-module (gn packages ocl-headers)
- #:use-module (gn packages ocl-icd))
-
-(define-public beignet
- (package
- (name "beignet")
- (version "1.1.1")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://01.org/sites/default/files/beignet-"
- version "-source.tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "068i5srqpncfw0kklxdyzxcm5w56pi91jp7pkv6cglzvnjgcdx4v"))))
- (inputs `(("autoconf" ,autoconf)
- ("llvm" ,llvm-3.5)
- ("libpthread-stubs", libpthread-stubs)
- ("clang" ,clang-3.5)
- ("libdrm" ,libdrm)
- ("libtool" ,libtool)
- ("libsm" ,libsm)
- ("libxfixes" ,libxfixes)
- ("libxext" ,libxext)
- ("libedit" ,libedit)
- ("xextproto" ,xextproto)
- ("python" ,python-2)
- ("opencl-headers" ,opencl-headers)
- ("glu" ,glu)
- ("zlib" ,zlib)
- ("pkg-config" ,pkg-config)
- ("freeglut" ,freeglut)
- ("mesa-utils" ,mesa-utils)
- ("ncurses" ,ncurses)
- ("ocl-icd" ,ocl-icd)))
- (build-system cmake-build-system)
- (arguments `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release" "-DCOMPILER=CLANG") #:tests? #f))
- (home-page "https://forge.imag.fr/projects/ocl-icd/")
- (synopsis "Intel's OpenCL framework")
- (description "Intel's OpenCL framework that works with Intel IvyBridge GPUs and above")
- (license license:gpl2)))
diff --git a/gn/packages/ocl-icd.scm b/gn/packages/ocl-icd.scm
deleted file mode 100644
index 17e85d7..0000000
--- a/gn/packages/ocl-icd.scm
+++ /dev/null
@@ -1,67 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gn packages ocl-icd)
- #:use-module ((guix licenses) #:prefix license:)
- #:use-module (gnu packages)
- #:use-module (gnu packages autotools)
- #:use-module (guix packages)
- #:use-module (guix download)
- #:use-module (guix build-system gnu)
- #:use-module (gnu packages bootstrap)
- #:use-module (gnu packages linux)
- #:use-module (gnu packages textutils)
- #:use-module (gnu packages base)
- #:use-module (gnu packages compression)
- #:use-module (gnu packages gnupg)
- #:use-module (gnu packages ruby)
- #:use-module (gnu packages opencl)
- #:use-module (gn packages ocl-headers)
- #:use-module (guix git-download))
-
-(define-public ocl-icd
- (package
- (name "ocl-icd")
- (version "2.2.9")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
- (inputs `(("zip" ,zip)
- ("autoconf" ,autoconf)
- ("automake" ,automake)
- ("ruby" ,ruby)
- ("libtool" ,libtool)
- ("opencl-headers" ,opencl-headers)
- ("libgcrypt" ,libgcrypt)))
- (build-system gnu-build-system)
- (arguments
- '(#:phases (modify-phases %standard-phases
- (add-after 'unpack `bootstrap
- (lambda _
- (zero? (system* "autoreconf" "-vfi")))))))
- (home-page "https://forge.imag.fr/projects/ocl-icd/")
- (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
- (description "OpenCL implementations are provided as ICD (Installable Client Driver).
- An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
- This free ICD Loader can load any (free or non free) ICD")
- (license license:gpl2)))
diff --git a/gn/packages/opencl-headers.scm b/gn/packages/opencl-headers.scm
deleted file mode 100644
index bddd136..0000000
--- a/gn/packages/opencl-headers.scm
+++ /dev/null
@@ -1,63 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016 Dennis Mungai <dmngaie@gmail.com>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gn packages opencl-headers)
- #:use-module ((guix licenses))
- #:use-module (guix download)
- #:use-module (guix git-download)
- #:use-module (guix packages)
- #:use-module (guix build-system gnu)
- #:use-module (gnu packages gl)
- #:use-module (gnu packages pkg-config)
- #:use-module (gnu packages xorg)
- #:use-module (gnu packages version-control)
- #:use-module (gnu packages linux))
-
-(define-public opencl-headers
-(let ((commit "c1770dc"))
- (package
- (name "opencl-headers")
- (version (string-append "2.1-" commit ))
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
- (commit commit)))
- (file-name (string-append name "-" commit))
- (sha256
- (base32
- "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
- (propagated-inputs '())
- (inputs '())
- (native-inputs '())
- (build-system gnu-build-system)
- (arguments
- '(#:phases
- (modify-phases %standard-phases
- (delete 'configure)
- (delete 'build)
- (delete 'check)
- (replace 'install
- (lambda* (#:key outputs #:allow-other-keys)
- (copy-recursively "." (string-append
- (assoc-ref outputs "out")
- "/include/CL")))))))
- (synopsis "The Khronos OpenCL headers")
- (description "This package provides the Khronos OpenCL headers")
- (home-page "https://www.khronos.org/registry/cl/")
- (license gpl2))))