diff options
author | Efraim Flashner | 2019-09-09 04:00:33 -0500 |
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committer | Efraim Flashner | 2019-09-09 04:00:33 -0500 |
commit | bd52cbc9878216debea6596d1f390c56f80ccd79 (patch) | |
tree | 0866d1caf519cc6806bb6f098a1247590176733b /gn/packages | |
parent | e7a41d43999283adf126fb72423b15bdfa082d91 (diff) | |
download | guix-bioinformatics-bd52cbc9878216debea6596d1f390c56f80ccd79.tar.gz |
gn: Move r-shiny-gn to its own module.
* gn/packages/r-shiny.scm (r-shiny-gn, js-strftime-0.9, js-es5-shim-2):
Move here.
Diffstat (limited to 'gn/packages')
-rw-r--r-- | gn/packages/javascript.scm | 31 | ||||
-rw-r--r-- | gn/packages/r-shiny.scm | 113 | ||||
-rw-r--r-- | gn/packages/statistics.scm | 95 |
3 files changed, 113 insertions, 126 deletions
diff --git a/gn/packages/javascript.scm b/gn/packages/javascript.scm index cf229a8..465259a 100644 --- a/gn/packages/javascript.scm +++ b/gn/packages/javascript.scm @@ -1,7 +1,6 @@ (define-module (gn packages javascript) #:use-module ((guix licenses) #:prefix license:) #:use-module (gnu packages compression) - #:use-module (gnu packages javascript) #:use-module (gn packages web) #:use-module (guix packages) #:use-module (guix download) @@ -540,33 +539,3 @@ not natively support it.") (description "FileSaver.js is the solution to saving files on the client-side, and is perfect for web apps that generates files on the client.") (license license:expat))) - -(define-public js-strftime-0.9 - (package - (inherit js-strftime) - (name "js-strftime") - (version "0.9.2") - (source (origin - (method git-fetch) - (uri (git-reference - (url"https://github.com/samsonjs/strftime") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "0g72286afcd2sxdsbm5k868ms6yqhbz0p4yfg33lmzbk9q42v9bs")))))) - -(define-public js-es5-shim-2 - (package - (inherit js-es5-shim) - (name "js-es5-shim") - (version "2.0.12") - (source (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/es-shims/es5-shim") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1j4f0rba6p9bnqvw0riami01nkj0svl3flm7c7d6xydr2642zz8d")))))) diff --git a/gn/packages/r-shiny.scm b/gn/packages/r-shiny.scm new file mode 100644 index 0000000..732a1a3 --- /dev/null +++ b/gn/packages/r-shiny.scm @@ -0,0 +1,113 @@ +(define-module (gn packages r-shiny) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (guix packages) + #:use-module (guix utils) + #:use-module (guix git-download) + #:use-module (guix build-system r) + #:use-module (gnu packages cran) + #:use-module (gnu packages javascript) + ) + +(define-public r-shiny-gn + (package + (inherit r-shiny) + (name "r-shiny-gn") + (arguments + `(#:modules ((guix build r-build-system) + (guix build minify-build-system) + (guix build utils) + (ice-9 match)) + #:imported-modules (,@%r-build-system-modules + (guix build minify-build-system)) + #:phases + (modify-phases (@ (guix build r-build-system) %standard-phases) + (add-after 'unpack 'replace-bundled-minified-JavaScript + (lambda* (#:key inputs #:allow-other-keys) + (let ((replace-file (lambda (old new) + (format #t "replacing ~a with ~a\n" old new) + (delete-file old) + (symlink new old)))) + ;; NOTE: Files in ./inst/www/shared/datepicker/js/locales/ + ;; contain just data. They are not minified code, so we don't + ;; replace them. + (with-directory-excursion "inst/www/shared" + (replace-file "bootstrap/shim/respond.min.js" + (string-append (assoc-ref inputs "js-respond") + "/share/javascript/respond.min.js")) + (replace-file "bootstrap/shim/html5shiv.min.js" + (string-append (assoc-ref inputs "js-html5shiv") + "/share/javascript/html5shiv.min.js")) + (replace-file "json2-min.js" + (string-append (assoc-ref inputs "js-json2") + "/share/javascript/json2.min.js")) + (replace-file "strftime/strftime-min.js" + (string-append (assoc-ref inputs "js-strftime") + "/share/javascript/strftime.min.js")) + (replace-file "highlight/highlight.pack.js" + (string-append (assoc-ref inputs "js-highlight") + "/share/javascript/highlight.min.js")) + (replace-file "datatables/js/jquery.dataTables.min.js" + (string-append (assoc-ref inputs "js-datatables") + "/share/javascript/jquery.dataTables.min.js")) + (replace-file "selectize/js/selectize.min.js" + (string-append (assoc-ref inputs "js-selectize") + "/share/javascript/selectize.min.js")) + (replace-file "selectize/js/es5-shim.min.js" + (string-append (assoc-ref inputs "js-es5-shim") + "/share/javascript/es5-shim.min.js")) + (for-each (match-lambda + ((source . target) + (delete-file target) + (minify source #:target target))) + '(("jqueryui/jquery-ui.js" . + "jqueryui/jquery-ui.min.js") + ("datepicker/js/bootstrap-datepicker.js" . + "datepicker/js/bootstrap-datepicker.min.js") + ("ionrangeslider/js/ion.rangeSlider.js" . + "ionrangeslider/js/ion.rangeSlider.min.js") + ("bootstrap/js/bootstrap.js" . + "bootstrap/js/bootstrap.min.js") + ("shiny.js" . + "shiny.min.js") + ("jquery.js" . + "jquery.min.js"))))) + #t))))) + (inputs + `(("js-datatables" ,js-datatables) + ("js-html5shiv" ,js-html5shiv) + ("js-json2" ,js-json2) + ("js-respond" ,js-respond) + ("js-selectize" ,js-selectize) + ("js-strftime" ,js-strftime-0.9) + ("js-highlight" ,js-highlight) + ("js-es5-shim" ,js-es5-shim-2))))) + +(define-public js-strftime-0.9 + (package + (inherit js-strftime) + (name "js-strftime") + (version "0.9.2") + (source (origin + (method git-fetch) + (uri (git-reference + (url"https://github.com/samsonjs/strftime") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0g72286afcd2sxdsbm5k868ms6yqhbz0p4yfg33lmzbk9q42v9bs")))))) + +(define-public js-es5-shim-2 + (package + (inherit js-es5-shim) + (name "js-es5-shim") + (version "2.0.12") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/es-shims/es5-shim") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1j4f0rba6p9bnqvw0riami01nkj0svl3flm7c7d6xydr2642zz8d")))))) diff --git a/gn/packages/statistics.scm b/gn/packages/statistics.scm index b21ad47..134213a 100644 --- a/gn/packages/statistics.scm +++ b/gn/packages/statistics.scm @@ -367,98 +367,3 @@ functions in total. Subject areas covered by the library include: differential equations, linear algebra, Fast Fourier Transforms and random numbers.") (license license:gpl3+))) - -(define-public r-shiny-gn - (package - (inherit r-shiny) - (name "r-shiny-gn") - (version "1.2.0") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/rstudio/shiny.git") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1kl3dh68h4cnrm3rqn9pddk5n6bsmr5x0626bkfv0qqi0q92zin4")))) - (arguments - `(#:modules ((guix build r-build-system) - (guix build minify-build-system) - (guix build utils) - (ice-9 match)) - #:imported-modules (,@%r-build-system-modules - (guix build minify-build-system)) - #:phases - (modify-phases (@ (guix build r-build-system) %standard-phases) - (add-after 'unpack 'replace-bundled-minified-JavaScript - (lambda* (#:key inputs #:allow-other-keys) - (let ((replace-file (lambda (old new) - (format #t "replacing ~a with ~a\n" old new) - (delete-file old) - (symlink new old)))) - ;; NOTE: Files in ./inst/www/shared/datepicker/js/locales/ - ;; contain just data. They are not minified code, so we don't - ;; replace them. - (with-directory-excursion "inst/www/shared" - (replace-file "bootstrap/shim/respond.min.js" - (string-append (assoc-ref inputs "js-respond") - "/share/javascript/respond.min.js")) - (replace-file "bootstrap/shim/html5shiv.min.js" - (string-append (assoc-ref inputs "js-html5shiv") - "/share/javascript/html5shiv.min.js")) - (replace-file "json2-min.js" - (string-append (assoc-ref inputs "js-json2") - "/share/javascript/json2.min.js")) - (replace-file "strftime/strftime-min.js" - (string-append (assoc-ref inputs "js-strftime") - "/share/javascript/strftime.min.js")) - (replace-file "highlight/highlight.pack.js" - (string-append (assoc-ref inputs "js-highlight") - "/share/javascript/highlight.min.js")) - (replace-file "datatables/js/jquery.dataTables.min.js" - (string-append (assoc-ref inputs "js-datatables") - "/share/javascript/jquery.dataTables.min.js")) - (replace-file "selectize/js/selectize.min.js" - (string-append (assoc-ref inputs "js-selectize") - "/share/javascript/selectize.min.js")) - (replace-file "selectize/js/es5-shim.min.js" - (string-append (assoc-ref inputs "js-es5-shim") - "/share/javascript/es5-shim.min.js")) - (for-each (match-lambda - ((source . target) - (delete-file target) - (minify source #:target target))) - '(("jqueryui/jquery-ui.js" . - "jqueryui/jquery-ui.min.js") - ("datepicker/js/bootstrap-datepicker.js" . - "datepicker/js/bootstrap-datepicker.min.js") - ("ionrangeslider/js/ion.rangeSlider.js" . - "ionrangeslider/js/ion.rangeSlider.min.js") - ("bootstrap/js/bootstrap.js" . - "bootstrap/js/bootstrap.min.js") - ("shiny.js" . - "shiny.min.js") - ("jquery.js" . - "jquery.min.js"))))) - #t))))) - (propagated-inputs - `(("r-crayon" ,r-crayon) - ("r-httpuv" ,r-httpuv) - ("r-mime" ,r-mime) - ("r-jsonlite" ,r-jsonlite) - ("r-xtable" ,r-xtable) - ("r-digest" ,r-digest) - ("r-htmltools" ,r-htmltools) - ("r-r6" ,r-r6) - ("r-sourcetools" ,r-sourcetools))) - (inputs - `(("js-datatables" ,js-datatables) - ("js-html5shiv" ,js-html5shiv) - ("js-json2" ,js-json2) - ("js-respond" ,js-respond) - ("js-selectize" ,js-selectize) - ("js-strftime" ,js-strftime-0.9) - ("js-highlight" ,js-highlight) - ("js-es5-shim" ,js-es5-shim-2))))) |