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authorDennis E. Mungai2016-03-04 20:38:48 +0300
committerDennis E. Mungai2016-03-04 20:38:48 +0300
commitda82f38fdc7c4126bac38412ddc4d250475841ab (patch)
tree9a08aaa9cd97e30c6b750c3a340ec636332ce71b /gn/packages
parent9c3aa56eaed9be30ee64cdca3b3426bd4dc6851b (diff)
downloadguix-bioinformatics-da82f38fdc7c4126bac38412ddc4d250475841ab.tar.gz
Bumped up to v.3.3.1-hotfix.
Fixes a bunch of build bugs
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/arrayfire.scm28
1 files changed, 16 insertions, 12 deletions
diff --git a/gn/packages/arrayfire.scm b/gn/packages/arrayfire.scm
index 23ff0af..f349db3 100644
--- a/gn/packages/arrayfire.scm
+++ b/gn/packages/arrayfire.scm
@@ -19,6 +19,7 @@
(define-module (gn packages arrayfire)
#:use-module ((guix licenses))
#:use-module (guix download)
+ #:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (guix packages)
@@ -36,7 +37,6 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages maths)
#:use-module (gnu packages web)
- #:use-module (gnu packages databases)
#:use-module (gnu packages ldc)
#:use-module (gnu packages python)
#:use-module (gnu packages xorg)
@@ -44,30 +44,35 @@
#:use-module (gnu packages linux))
(define-public arrayfire
+(let ((commit "9ca1ea0"))
(package
(name "arrayfire")
- (version "3.3.0")
+ (version "3.3.1-hotfix")
(source (origin
- (method url-fetch)
- (uri (string-append "http://arrayfire.com/arrayfire_source/arrayfire-full-" version
- ".tar.bz2"))
- (file-name (string-append name "-" version ".tar.bz2"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/arrayfire/arrayfire.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
(sha256
(base32
- "07pbw6vzny3z86y890c0rx7rk31ddchxrrdslk661iq512xppr0g"))))
+ "0b270w9nyf2v7knda94x47c8snf06yb1jlj3cgdv8l5cq1q2bqgm"))))
(native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)
("cmake" ,cmake)
("gawk" ,gawk)
+ ("glew" ,glew)
("libtool" ,libtool)
("pkg-config" ,pkg-config)))
(inputs `(("boost" ,boost)
("glfw" ,glfw)
("curl" ,curl)
+ ("atlas" ,atlas)
("dbus" ,dbus)
("enca" ,enca)
("eudev" ,eudev)
("glew" ,glew)
+ ("glib" ,glib)
("lapack" ,lapack)
("libcap" ,libcap)
("libjpeg" ,libjpeg)
@@ -75,7 +80,6 @@
("libtiff" ,libtiff)
("libyajl" ,libyajl)
("mesa-utils" ,mesa-utils)
- ("mysql" ,mysql)
("python" ,python-2)
("freeimage" ,freeimage)
("fftw" ,fftw)
@@ -88,11 +92,11 @@
("cmake" ,cmake)))
(build-system cmake-build-system)
(arguments
- `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release -DBUILD_OPENCL=ON") #:tests? #f))
+ `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release" "-DBUILD_OPENCL=OFF" "-DBUILD_GRAPHICS=OFF") #:tests? #f))
(synopsis "ArrayFire: a general purpose GPU library. https://arrayfire.com")
(description "ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple.")
(home-page "http://arrayfire.com/")
- (license (list gpl2 gpl2+ gpl3 gpl3+))))
+ (license (list gpl2 gpl2+ gpl3 gpl3+)))))
(define-public glfw
(package
@@ -104,13 +108,14 @@
version ".tar.gz"))
(sha256
(base32
- "08pixv8hd5xsccf7l8cqcijjqaq4k4da8qbp77wggal2fq445ika"))))
+ "067y98a9s78vpz7xsg889xnwfaza7c5gdv97yg9cgrdl0iljvsgp"))))
(build-system cmake-build-system)
(arguments `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON") #:tests? #f))
(native-inputs `(("autoconf" ,autoconf)
("automake" ,automake)
("cmake" ,cmake)
("libtool" ,libtool)
+ ("libpthread-stubs" ,libpthread-stubs)
("pkg-config" ,pkg-config)))
(inputs `(("curl" ,curl)
("dbus" ,dbus)
@@ -127,7 +132,6 @@
("xineramaproto" ,xineramaproto)
("libxinerama" ,libxinerama)
("libxcursor" ,libxcursor)
- ("mysql" ,mysql)
("python" ,python-2)))
(home-page "http://www.glfw.org/")
(synopsis "glfw is an Open Source, multi-platform library for creating windows with OpenGL contexts and receiving input and events.")