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authorDennis E. Mungai2016-03-08 23:14:40 +0300
committerDennis E. Mungai2016-03-08 23:14:40 +0300
commitc27a4c0a6586fcb3532a39b1d7875856e4d1e574 (patch)
tree859c249d236bd0d35602f2d0c7a23807519778ab /gn/packages
parent7ff3a91d17727d6613e403854686866f74bcb1a8 (diff)
downloadguix-bioinformatics-c27a4c0a6586fcb3532a39b1d7875856e4d1e574.tar.gz
pocl updated with all dependencies.
Have fun.
Diffstat (limited to 'gn/packages')
-rw-r--r--gn/packages/pocl.scm122
1 files changed, 116 insertions, 6 deletions
diff --git a/gn/packages/pocl.scm b/gn/packages/pocl.scm
index c5cb8cb..93534b7 100644
--- a/gn/packages/pocl.scm
+++ b/gn/packages/pocl.scm
@@ -20,6 +20,7 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix git-download)
#:use-module (guix download)
+ #:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (guix packages)
#:use-module (gnu packages algebra)
@@ -38,9 +39,13 @@
#:use-module (gnu packages maths)
#:use-module (gnu packages mpi)
#:use-module (gnu packages web)
+ #:use-module (gnu packages perl)
#:use-module (gnu packages python)
#:use-module (gnu packages xorg)
- #:use-module (gnu packages version-control)
+ #:use-module (gnu packages version-control)
+ #:use-module (gnu packages ruby)
+ #:use-module (gnu packages gnupg)
+ #:use-module (gnu packages zip)
#:use-module (gnu packages linux))
(define-public pocl
@@ -76,19 +81,28 @@
("libjpeg" ,libjpeg)
("libltdl" ,libltdl)
("libtiff" ,libtiff)
- ("llvm" ,llvm)
+ ("llvm" ,llvm-3.7.1)
+ ("ocl-icd" ,ocl-icd)
+ ("opencl-headers" ,opencl-headers)
("mesa-utils" ,mesa-utils)
("openmpi" ,openmpi)
+ ("perl" ,perl)
("randrproto" ,randrproto)
("libxrandr" ,libxrandr)
("xineramaproto" ,xineramaproto)
("libxinerama" ,libxinerama)
("libxcursor" ,libxcursor)
("fftw-openmpi" ,fftw-openmpi)))
- (build-system cmake-build-system)
- (arguments
- `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release" "-DBUILD_SHARED_LIBS=ON")
- #:tests? #f))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:configure-flags '("--enable-icd")
+ #:tests? #f
+ #:phases
+ (modify-phases %standard-phases
+ (add-before
+ 'configure 'rewrite-usr-bin
+ (lambda _
+ (zero? (system* "./autogen.sh")))))))
(synopsis "pocl: Portable Computing Language (pocl) aims to become a MIT-licensed
open source implementation of the OpenCL standard which can be easily adapted for
new targets and devices, both for homogeneous CPU and heterogenous GPUs/accelerators.")
@@ -97,3 +111,99 @@
new targets and devices, both for homogeneous CPU and heterogenous GPUs/accelerators.")
(home-page "http://portablecl.org/")
(license license:gpl2))))
+
+(define-public llvm-3.7.1
+(package
+ (name "llvm-3.7.1")
+ (version "3.7.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://llvm.org/releases/"
+ version "/llvm-" version ".src.tar.xz"))
+ (sha256
+ (base32
+ "1masakdp9g2dan1yrazg7md5am2vacbkb3nahb3dchpc1knr8xxy"))))
+ (build-system cmake-build-system)
+ (native-inputs
+ `(("python" ,python-wrapper)
+ ("perl" ,perl)))
+ (arguments
+ `(#:configure-flags '("-DCMAKE_SKIP_BUILD_RPATH=FALSE"
+ "-DCMAKE_BUILD_WITH_INSTALL_RPATH=FALSE")))
+ (home-page "http://www.llvm.org")
+ (synopsis "Optimizing compiler infrastructure")
+ (description
+ "LLVM is a compiler infrastructure designed for compile-time, link-time,
+runtime, and idle-time optimization of programs from arbitrary programming
+languages. It currently supports compilation of C and C++ programs, using
+front-ends derived from GCC 4.0.1. A new front-end for the C family of
+languages is in development. The compiler infrastructure includes mirror sets
+of programming tools as well as libraries with equivalent functionality.")
+ (license license:ncsa)))
+
+(define-public ocl-icd
+ (package
+ (name "ocl-icd")
+ (version "2.2.9")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://forge.imag.fr/frs/download.php/716/ocl-icd-"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1rgaixwnxmrq2aq4kcdvs0yx7i6krakarya9vqs7qwsv5hzc32hc"))))
+ (inputs `(("zip" ,zip)
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("ruby" ,ruby)
+ ("libtool" ,libtool)
+ ("opencl-headers" ,opencl-headers)
+ ("libgcrypt" ,libgcrypt)))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack `bootstrap
+ (lambda _
+ (zero? (system* "autoreconf" "-vfi")))))))
+ (home-page "https://forge.imag.fr/projects/ocl-icd/")
+ (synopsis "OpenCL implementations are provided as ICD (Installable Client Driver).")
+ (description "OpenCL implementations are provided as ICD (Installable Client Driver).
+ An OpenCL program can use several ICD thanks to the use of an ICD Loader as provided by this project.
+ This free ICD Loader can load any (free or non free) ICD")
+ (license license:gpl2)))
+
+ (define-public opencl-headers
+(let ((commit "c1770dc"))
+ (package
+ (name "opencl-headers")
+ (version (string-append "2.1-" commit ))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/KhronosGroup/OpenCL-Headers.git")
+ (commit commit)))
+ (file-name (string-append name "-" commit))
+ (sha256
+ (base32
+ "0m9fkblqja0686i2jjqiszvq3df95gp01a2674xknlmkd6525rck"))))
+ (propagated-inputs '())
+ (inputs '())
+ (native-inputs '())
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (delete 'check)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (copy-recursively "." (string-append
+ (assoc-ref outputs "out")
+ "/include/CL")))))))
+ (synopsis "The Khronos OpenCL headers")
+ (description "This package provides the Khronos OpenCL headers")
+ (home-page "https://www.khronos.org/registry/cl/")
+ (license license:gpl2))))