Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformatics

1 files changed, 0 insertions, 87 deletions

diff --git a/gn/packages/sparql-query.scm b/gn/packages/sparql-query.scm
deleted file mode 100644
index dd6f553..0000000
--- a/gn/packages/sparql-query.scm
+++ /dev/null
@@ -1,87 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gn packages sparql-query)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages)
-  #:use-module (guix utils)
-  #:use-module (guix download)
-  #:use-module (guix build-system gnu)
-  #:use-module (gnu packages)
-  #:use-module (gnu packages compression)
-  #:use-module (gnu packages curl)
-  #:use-module (gnu packages glib)
-  #:use-module (gnu packages readline)
-  #:use-module (gnu packages ncurses)
-  #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages xml))
-
-(define-public sparql-query
-  (package
-    (name "sparql-query")
-    (version "1.1")
-    (source (origin
-      (method url-fetch)
-      (uri (string-append "https://github.com/tialaramex/sparql-query/archive/"
-                          version ".tar.gz"))
-      (sha256
-       (base32 "0yq3k20472rv8npcc420q9ab6idy584g5y0q501d360k5q0ggr8w"))
-      (file-name (string-append name "-" version ".tar.gz"))))
-    (build-system gnu-build-system)
-    (inputs
-     `(("readline" ,readline)
-       ("ncurses" ,ncurses)
-       ("glib" ,glib)
-       ("libxml2" ,libxml2)
-       ("curl" ,curl)))
-    (native-inputs
-     `(("pkg-config" ,pkg-config)))
-    (arguments
-     `(#:tests? #t
-       #:make-flags '("CC=gcc")
-       #:phases
-       (modify-phases %standard-phases
-         (delete 'configure)
-         (add-after 'unpack 'remove-git-dependency
-           (lambda _
-             (substitute* "Makefile"
-               (("^gitrev :=.*$") "gitrev = \"v1.0-3-gb015131\""))))
-         (replace 'install
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let* ((out (assoc-ref outputs "out"))
-                    (bin (string-append out "/bin")))
-               (install-file "sparql-query" bin)
-               (system* "ln" "--symbolic"
-                        (string-append bin "/sparql-query")
-                        (string-append bin "/sparql-update")))))
-         (replace 'check
-           (lambda _
-             (and
-              ;; The make-flags seem to get ignored here.
-              (zero? (system* "make" "CC=gcc" "scan-test"))
-              (zero? (system* "./scan-test"))))))))
-    (home-page "https://github.com/tialaramex/sparql-query/")
-    (synopsis "Command-line tool for accessing SPARQL endpoints over HTTP")
-    (description "sparql-query is a command-line tool for accessing SPARQL
-endpoints over HTTP.  It has been intentionally designed to 'feel' similar to
-tools for interrogating SQL databases. For example, you can enter a query over
-several lines, using a semi-colon at the end of a line to indicate the end of
-your query.  It also supports readline so that you can more easily recall and
-edit previous queries, even across sessions. It can be used non-interactively,
-for example from a shell script.")
-    (license license:gpl2+)))