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authorpjotrp2017-07-09 11:52:02 +0000
committerpjotrp2017-07-09 11:52:02 +0000
commit5870720799d5825d1e4a7e6bd7dbf14a99812097 (patch)
tree2f733aa1146660183c8580ba9864dd62770d16fe /gn/packages/shell.scm
parentbdaf5cd6c71e98139c63360a345ab51e25ebc5fa (diff)
downloadguix-bioinformatics-5870720799d5825d1e4a7e6bd7dbf14a99812097.tar.gz
Update gemma and shunit2 packages
Diffstat (limited to 'gn/packages/shell.scm')
-rw-r--r--gn/packages/shell.scm12
1 files changed, 12 insertions, 0 deletions
diff --git a/gn/packages/shell.scm b/gn/packages/shell.scm
index e457dce..eb9178f 100644
--- a/gn/packages/shell.scm
+++ b/gn/packages/shell.scm
@@ -3,6 +3,7 @@
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (gnu packages)
+ #:use-module (gnu packages base)
#:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
)
@@ -20,6 +21,9 @@
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32 "11savxc6qliqv25kv59qak6j7syjv95hbpmq1szn1mzn32g2gc25"))))
+ (inputs `(
+ ("coreutils" ,coreutils) ; for mktemp and od
+ ))
(build-system gnu-build-system)
(arguments
`(
@@ -28,6 +32,14 @@
(modify-phases %standard-phases
(delete 'configure)
(delete 'build)
+ (add-after 'unpack 'replace-binary-paths
+ (lambda _
+ (substitute* "source/2.0/src/shell/shunit2"
+ (("/bin/sh") (which "sh"))
+ (("exec mktemp") (string-append "exec " (which "mktemp")))
+ (("/usr/bin/od") (which "od"))
+ )#t))
+
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))